Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   MY9_RS01970 Genome accession   NC_017743
Coordinates   367571..367969 (-) Length   132 a.a.
NCBI ID   WP_014662735.1    Uniprot ID   -
Organism   Bacillus sp. JS     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 362571..372969
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MY9_RS21480 - 363320..363515 (+) 196 Protein_336 hypothetical protein -
  MY9_RS01940 (MY9_0351) - 363535..363990 (+) 456 WP_014662729.1 RDD family protein -
  MY9_RS01945 (MY9_0352) - 364071..364403 (+) 333 WP_014662730.1 YckD family protein -
  MY9_RS01950 (MY9_0353) - 364530..364952 (+) 423 WP_041521243.1 MarR family transcriptional regulator -
  MY9_RS01955 (MY9_0354) - 364940..365281 (+) 342 WP_014662732.1 DUF3147 family protein -
  MY9_RS01960 (MY9_0355) - 365300..366028 (+) 729 WP_014662733.1 AAA family ATPase -
  MY9_RS01965 (MY9_0356) bglC 366101..367534 (+) 1434 WP_014662734.1 6-phospho-beta-glucosidase -
  MY9_RS01970 (MY9_0357) nin/comJ 367571..367969 (-) 399 WP_014662735.1 DNA-entry nuclease inhibitor Regulator
  MY9_RS01975 (MY9_0358) nucA/comI 367996..368445 (-) 450 WP_014662736.1 DNA-entry nuclease Machinery gene
  MY9_RS01980 (MY9_0359) tlpC 368613..370334 (-) 1722 WP_014662737.1 methyl-accepting chemotaxis protein TlpC -
  MY9_RS01985 (MY9_0360) hxlB 370445..371002 (-) 558 WP_014662738.1 6-phospho-3-hexuloisomerase -
  MY9_RS01990 (MY9_0361) hxlA 371008..371640 (-) 633 WP_014662739.1 3-hexulose-6-phosphate synthase -
  MY9_RS01995 (MY9_0362) hxlR 371873..372235 (+) 363 WP_014662740.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 14967.95 Da        Isoelectric Point: 4.7105

>NTDB_id=50577 MY9_RS01970 WP_014662735.1 367571..367969(-) (nin/comJ) [Bacillus sp. JS]
MIKSWKPQELSISYHQFTVFQKDSAPPVMDWTDEAIEKGYTAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HLTENGIQIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=50577 MY9_RS01970 WP_014662735.1 367571..367969(-) (nin/comJ) [Bacillus sp. JS]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTGCACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGTTATACTGCGGCAGACGGGGCCATTTCCTTTGAGGCGCAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAGAAAAAAGTGACTGTTCCTTTT
CATCTCACAGAAAACGGAATTCAAATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTCCCCAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCTGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

96.212

100

0.962


Multiple sequence alignment