Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   I6L84_RS00645 Genome accession   NZ_CP077224
Coordinates   116379..116819 (-) Length   146 a.a.
NCBI ID   WP_060554248.1    Uniprot ID   -
Organism   Streptococcus gordonii strain FDAARGOS 1454     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 111379..121819
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L84_RS00630 (I6L84_00630) - 113755..114528 (+) 774 WP_248842273.1 zinc ribbon domain-containing protein -
  I6L84_RS00635 (I6L84_00635) - 114572..115879 (+) 1308 WP_060554250.1 SPFH domain-containing protein -
  I6L84_RS00640 (I6L84_00640) - 115912..116382 (-) 471 WP_060554249.1 DUF3021 family protein -
  I6L84_RS00645 (I6L84_00645) brsR 116379..116819 (-) 441 WP_060554248.1 LytTR family DNA-binding domain-containing protein Regulator
  I6L84_RS00650 (I6L84_00650) hexB 117004..118947 (+) 1944 WP_060554247.1 DNA mismatch repair endonuclease MutL Machinery gene
  I6L84_RS00655 (I6L84_00655) - 118984..119505 (-) 522 WP_060554246.1 RDD family protein -
  I6L84_RS00660 (I6L84_00660) - 119489..119992 (-) 504 WP_060554245.1 helix-turn-helix domain-containing protein -
  I6L84_RS00665 (I6L84_00665) ruvA 120162..120755 (+) 594 WP_060554244.1 Holliday junction branch migration protein RuvA Machinery gene
  I6L84_RS00670 (I6L84_00670) - 120765..121319 (+) 555 WP_060554243.1 DNA-3-methyladenine glycosylase I -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17280.88 Da        Isoelectric Point: 9.8891

>NTDB_id=505753 I6L84_RS00645 WP_060554248.1 116379..116819(-) (brsR) [Streptococcus gordonii strain FDAARGOS 1454]
MKVKLRIDSQVTEDSVSIEARLMTESIQELVHFAQHLGKEEKIHVKKEDNIYLLDAKEIHRIYTENRQVRVRTAKDSYRA
QQALYQLLQVLPDYFLQISQSEILNSRQINHLKLTPNGLIQIFLKNGDQTYSSRRYLKSIKERLQL

Nucleotide


Download         Length: 441 bp        

>NTDB_id=505753 I6L84_RS00645 WP_060554248.1 116379..116819(-) (brsR) [Streptococcus gordonii strain FDAARGOS 1454]
ATGAAAGTTAAGCTAAGAATCGATTCTCAAGTCACCGAAGACTCCGTCAGCATTGAGGCTCGCCTCATGACAGAAAGCAT
TCAGGAATTGGTCCACTTTGCTCAACATCTAGGCAAGGAGGAAAAGATTCATGTCAAGAAAGAAGACAACATCTATCTGC
TGGACGCTAAGGAAATCCACCGAATCTATACAGAAAATCGTCAGGTCCGGGTCCGAACGGCAAAAGACAGCTATCGAGCT
CAACAAGCTCTTTATCAGTTGCTACAGGTCCTGCCGGACTATTTTCTGCAGATTTCTCAGTCGGAGATTCTCAACAGCCG
ACAAATTAACCACCTCAAGCTGACTCCAAATGGTCTGATTCAAATATTTCTGAAAAACGGTGATCAGACATACTCGTCCC
GCCGTTATCTCAAATCTATCAAAGAAAGGTTGCAATTATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.301

100

0.363