Detailed information NTG0050558

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPPC18_RS01685
• Genome accession: NC_017742
• Coordinates: 343754..344554 (+)
• Length: 266 a.a.
• NCBI ID: WP_000835224.1
• Uniprot ID: -
• Organism: Helicobacter pylori PeCan18
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 338754..349554

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPPC18_RS01650 (HPPC18_01655)	pseH	339253..339795 (+)	543	WP_000742583.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPPC18_RS01655 (HPPC18_01660)	-	339728..340666 (-)	939	WP_000833973.1	tetraacyldisaccharide 4'-kinase	-
HPPC18_RS01660 (HPPC18_01665)	-	340663..341445 (-)	783	WP_001168204.1	NAD+ synthase	-
HPPC18_RS01670 (HPPC18_01670)	ilvC	341695..342687 (+)	993	WP_001207815.1	ketol-acid reductoisomerase	-
HPPC18_RS01675 (HPPC18_01675)	minD	342711..343517 (+)	807	WP_001019086.1	septum site-determining protein MinD	-
HPPC18_RS01680 (HPPC18_01680)	minE	343514..343747 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
HPPC18_RS01685 (HPPC18_01685)	dprA	343754..344554 (+)	801	WP_000835224.1	DNA-processing protein DprA	Machinery gene
HPPC18_RS01690 (HPPC18_01690)	dprB	344551..344955 (+)	405	WP_000599182.1	Holliday junction resolvase RuvX	Machinery gene
HPPC18_RS01695 (HPPC18_01695)	-	345270..345488 (+)	219	WP_000538394.1	tetratricopeptide repeat protein	-
HPPC18_RS01700 (HPPC18_01700)	-	345675..346013 (+)	339	WP_000699880.1	hypothetical protein	-
HPPC18_RS01705 (HPPC18_01705)	-	345997..346557 (+)	561	WP_001035880.1	hypothetical protein	-
HPPC18_RS01710 (HPPC18_01710)	-	346694..347575 (-)	882	WP_001117167.1	RluA family pseudouridine synthase	-
HPPC18_RS01715 (HPPC18_01715)	recJ	347575..349125 (-)	1551	WP_000810774.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29847.79 Da
• Isoelectric Point: 8.5826

>NTDB_id=50558 HPPC18_RS01685 WP_000835224.1 343754..344554(+) (dprA) [Helicobacter pylori PeCan18]
MKSHFQYSALENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCTKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=50558 HPPC18_RS01685 WP_000835224.1 343754..344554(+) (dprA) [Helicobacter pylori PeCan18]
ATGAAAAGCCATTTCCAATACAGTGCACTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCACCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTA
GATATTATCGCTCAAGAAAACGCCTTGCCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAGAAATACCAAAAACCCTTGTTTGTTTTACCCCAACGCCTGAATGAGAGCGACGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGATT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCACGAAAAACCCTAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAACTTTTAGAATACGAGCTGTTGGGTAAGATTAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414