Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   KQ256_RS17265 Genome accession   NZ_CP076814
Coordinates   3601925..3602560 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain UC21460     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3596925..3607560
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KQ256_RS17245 (KQ256_17240) - 3597002..3597817 (+) 816 WP_000011163.1 DsbC family protein -
  KQ256_RS17250 (KQ256_17245) - 3598062..3599363 (+) 1302 WP_039254228.1 homoserine dehydrogenase -
  KQ256_RS17255 (KQ256_17250) thrC 3599419..3600558 (+) 1140 WP_000063593.1 threonine synthase -
  KQ256_RS17260 (KQ256_17255) pbpG 3600666..3601712 (-) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  KQ256_RS17265 (KQ256_17260) letA 3601925..3602560 (+) 636 WP_000633799.1 response regulator Regulator
  KQ256_RS17270 (KQ256_17265) pilS 3602571..3604139 (+) 1569 WP_001160326.1 ATP-binding protein Regulator
  KQ256_RS17275 (KQ256_17270) - 3604164..3605585 (+) 1422 WP_046693170.1 sigma-54 dependent transcriptional regulator -
  KQ256_RS17280 (KQ256_17275) - 3605589..3606773 (-) 1185 WP_000939107.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=505094 KQ256_RS17265 WP_000633799.1 3601925..3602560(+) (letA) [Acinetobacter baumannii strain UC21460]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=505094 KQ256_RS17265 WP_000633799.1 3601925..3602560(+) (letA) [Acinetobacter baumannii strain UC21460]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGTGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCAGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGTGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55