Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | ITP52_RS08610 | Genome accession | NZ_CP064818 |
| Coordinates | 1750912..1751361 (+) | Length | 149 a.a. |
| NCBI ID | WP_014475770.1 | Uniprot ID | A0A0D1KPR3 |
| Organism | Bacillus subtilis strain SH1 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 1745912..1756361
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ITP52_RS08590 (ITP52_08590) | hxlR | 1747123..1747485 (-) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
| ITP52_RS08595 (ITP52_08595) | hxlA | 1747718..1748350 (+) | 633 | WP_041850680.1 | 3-hexulose-6-phosphate synthase | - |
| ITP52_RS08600 (ITP52_08600) | hxlB | 1748356..1748913 (+) | 558 | WP_041850679.1 | 6-phospho-3-hexuloisomerase | - |
| ITP52_RS08605 (ITP52_08605) | tlpC | 1749023..1750744 (+) | 1722 | WP_021481821.1 | methyl-accepting chemotaxis protein TlpC | - |
| ITP52_RS08610 (ITP52_08610) | nucA/comI | 1750912..1751361 (+) | 450 | WP_014475770.1 | DNA-entry nuclease | Machinery gene |
| ITP52_RS08615 (ITP52_08615) | nin/comJ | 1751388..1751786 (+) | 399 | WP_021481824.1 | DNA-entry nuclease inhibitor | Regulator |
| ITP52_RS08620 (ITP52_08620) | bglC | 1751823..1753256 (-) | 1434 | WP_038828490.1 | 6-phospho-beta-glucosidase | - |
| ITP52_RS08625 (ITP52_08625) | yckD | 1753410..1753742 (-) | 333 | WP_003246247.1 | YckD family protein | - |
| ITP52_RS08630 (ITP52_08630) | yckC | 1753824..1754279 (-) | 456 | WP_024572178.1 | RDD family protein | - |
| ITP52_RS08635 (ITP52_08635) | - | 1754299..1754496 (-) | 198 | WP_120363256.1 | hypothetical protein | - |
| ITP52_RS08640 (ITP52_08640) | yckB | 1754657..1755520 (+) | 864 | WP_080121173.1 | transporter substrate-binding domain-containing protein | - |
| ITP52_RS08645 (ITP52_08645) | yckA | 1755530..1756210 (+) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16440.39 Da Isoelectric Point: 4.5282
>NTDB_id=504893 ITP52_RS08610 WP_014475770.1 1750912..1751361(+) (nucA/comI) [Bacillus subtilis strain SH1]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=504893 ITP52_RS08610 WP_014475770.1 1750912..1751361(+) (nucA/comI) [Bacillus subtilis strain SH1]
GTGAACATCACGACGGACATCATAAAAACAATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCTTCTGACCGTT
ATCCCGAAACGGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATCGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
GTGAACATCACGACGGACATCATAAAAACAATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCTTCTGACCGTT
ATCCCGAAACGGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATCGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
98.658 |
100 |
0.987 |