Detailed information NTG0504892

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ITP52_RS08440
• Genome accession: NZ_CP064818
• Coordinates: 1693538..1694686 (-)
• Length: 382 a.a.
• NCBI ID: WP_043940053.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SH1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1688538..1699686

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ITP52_RS08410 (ITP52_08410)	yclO	1689253..1690200 (-)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-
ITP52_RS08415 (ITP52_08415)	ceuB	1690193..1691143 (-)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
ITP52_RS08420 (ITP52_08420)	thrD	1691528..1692892 (+)	1365	WP_043940054.1	aspartate kinase	-
ITP52_RS08425 (ITP52_08425)	yczN	1693046..1693159 (+)	114	WP_003234495.1	YjcZ family sporulation protein	-
ITP52_RS08430 (ITP52_08430)	yczM	1693241..1693330 (+)	90	WP_015482794.1	YjcZ family sporulation protein	-
ITP52_RS08435 (ITP52_08435)	phrC	1693432..1693554 (-)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
ITP52_RS08440 (ITP52_08440)	rapC	1693538..1694686 (-)	1149	WP_043940053.1	response regulator aspartate phosphatase RapC	Regulator
ITP52_RS08445 (ITP52_08445)	yclK	1694850..1696271 (-)	1422	WP_072173981.1	two-component system sensor histidine kinase YclK	-
ITP52_RS08450 (ITP52_08450)	yclJ	1696258..1696941 (-)	684	WP_003246532.1	two-component system response regulator YclJ	-
ITP52_RS08455 (ITP52_08455)	yclI	1697154..1698614 (+)	1461	WP_041850694.1	ABC transporter permease	-
ITP52_RS08460 (ITP52_08460)	yclH	1698630..1699310 (+)	681	WP_041850693.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45709.75 Da
• Isoelectric Point: 4.9618

>NTDB_id=504892 ITP52_RS08440 WP_043940053.1 1693538..1694686(-) (rapC) [Bacillus subtilis strain SH1]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVFTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=504892 ITP52_RS08440 WP_043940053.1 1693538..1694686(-) (rapC) [Bacillus subtilis strain SH1]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTTCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.476	100	0.995
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568