Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   KQ251_RS18935 Genome accession   NZ_CP076804
Coordinates   3947126..3947761 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain UC24371     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3942126..3952761
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KQ251_RS18920 (KQ251_18845) - 3942913..3944097 (+) 1185 WP_000939107.1 S41 family peptidase -
  KQ251_RS18925 (KQ251_18850) - 3944101..3945522 (-) 1422 WP_045900575.1 sigma-54 dependent transcriptional regulator -
  KQ251_RS18930 (KQ251_18855) pilS 3945547..3947115 (-) 1569 WP_045900574.1 PAS domain-containing sensor histidine kinase Regulator
  KQ251_RS18935 (KQ251_18860) letA 3947126..3947761 (-) 636 WP_000633799.1 response regulator Regulator
  KQ251_RS18940 (KQ251_18865) pbpG 3947974..3949020 (+) 1047 WP_005140205.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  KQ251_RS18945 (KQ251_18870) thrC 3949129..3950268 (-) 1140 WP_000063593.1 threonine synthase -
  KQ251_RS18950 (KQ251_18875) - 3950324..3951625 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  KQ251_RS18955 (KQ251_18880) - 3951870..3952685 (-) 816 WP_000011161.1 DsbC family protein -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=504877 KQ251_RS18935 WP_000633799.1 3947126..3947761(-) (letA) [Acinetobacter baumannii strain UC24371]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=504877 KQ251_RS18935 WP_000633799.1 3947126..3947761(-) (letA) [Acinetobacter baumannii strain UC24371]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCATTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAACCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55