Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | HCW_RS01570 | Genome accession | NC_017737 |
| Coordinates | 311784..312359 (+) | Length | 191 a.a. |
| NCBI ID | WP_014660476.1 | Uniprot ID | I0EKY4 |
| Organism | Helicobacter cetorum MIT 00-7128 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 306784..317359
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HCW_RS01545 (HCW_01565) | - | 307466..309499 (+) | 2034 | WP_014660471.1 | ATP-dependent helicase | - |
| HCW_RS01550 (HCW_01570) | flgA | 309496..310158 (+) | 663 | WP_014660472.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| HCW_RS01555 (HCW_01575) | - | 310170..310736 (+) | 567 | WP_014660473.1 | UbiX family flavin prenyltransferase | - |
| HCW_RS01560 (HCW_01580) | coaD | 310736..311218 (+) | 483 | WP_014660474.1 | pantetheine-phosphate adenylyltransferase | - |
| HCW_RS01565 (HCW_01585) | tmk | 311221..311796 (+) | 576 | WP_014660475.1 | dTMP kinase | - |
| HCW_RS01570 (HCW_01590) | comFC | 311784..312359 (+) | 576 | WP_014660476.1 | phosphoribosyltransferase | Machinery gene |
| HCW_RS01575 (HCW_01595) | - | 312361..316674 (-) | 4314 | WP_014660477.1 | S6 family peptidase | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21485.14 Da Isoelectric Point: 9.7121
>NTDB_id=50470 HCW_RS01570 WP_014660476.1 311784..312359(+) (comFC) [Helicobacter cetorum MIT 00-7128]
MRCLTCLKLSFKPLCQSCLNDLSLRLKVRVLEGVSVYSFYAYSEVEDLIKSKYSLIGSRLLPLLAQKASREFLKILKEKG
LNAPLYGIAIDDRVKSFYSHSAVLLKAFCKNNLKATYGNLRATNSIAYAGKSLEFRTNNPRNFNFKGDKSLDYFLLDDII
TTGTTLKEALSYLKNLGIKVHFAIALCDVSE
MRCLTCLKLSFKPLCQSCLNDLSLRLKVRVLEGVSVYSFYAYSEVEDLIKSKYSLIGSRLLPLLAQKASREFLKILKEKG
LNAPLYGIAIDDRVKSFYSHSAVLLKAFCKNNLKATYGNLRATNSIAYAGKSLEFRTNNPRNFNFKGDKSLDYFLLDDII
TTGTTLKEALSYLKNLGIKVHFAIALCDVSE
Nucleotide
Download Length: 576 bp
>NTDB_id=50470 HCW_RS01570 WP_014660476.1 311784..312359(+) (comFC) [Helicobacter cetorum MIT 00-7128]
ATGCGTTGCTTAACTTGCTTAAAACTCTCTTTTAAACCCCTTTGTCAAAGCTGTTTGAATGACCTATCTTTACGATTAAA
AGTAAGAGTCTTAGAAGGTGTGAGCGTGTATAGCTTTTATGCTTATAGTGAAGTAGAAGATTTAATCAAAAGCAAGTATT
CTCTCATTGGCTCTCGCCTTTTACCTTTGCTTGCCCAAAAAGCTAGTAGAGAGTTTTTAAAAATCTTAAAAGAAAAGGGT
TTGAACGCCCCCCTTTATGGCATAGCTATTGATGATAGAGTGAAGTCTTTTTACTCACATTCGGCTGTGCTTTTAAAAGC
TTTTTGCAAAAACAATCTAAAAGCCACTTATGGGAATTTAAGGGCAACCAATTCTATCGCTTATGCAGGAAAAAGCCTAG
AATTTCGCACAAACAACCCTAGAAACTTTAATTTCAAAGGCGACAAAAGCTTAGATTACTTCTTGCTTGATGATATTATT
ACTACCGGAACCACCCTAAAAGAGGCTCTTAGTTATCTTAAAAATTTAGGCATAAAAGTGCATTTTGCTATCGCATTATG
CGATGTAAGTGAGTAG
ATGCGTTGCTTAACTTGCTTAAAACTCTCTTTTAAACCCCTTTGTCAAAGCTGTTTGAATGACCTATCTTTACGATTAAA
AGTAAGAGTCTTAGAAGGTGTGAGCGTGTATAGCTTTTATGCTTATAGTGAAGTAGAAGATTTAATCAAAAGCAAGTATT
CTCTCATTGGCTCTCGCCTTTTACCTTTGCTTGCCCAAAAAGCTAGTAGAGAGTTTTTAAAAATCTTAAAAGAAAAGGGT
TTGAACGCCCCCCTTTATGGCATAGCTATTGATGATAGAGTGAAGTCTTTTTACTCACATTCGGCTGTGCTTTTAAAAGC
TTTTTGCAAAAACAATCTAAAAGCCACTTATGGGAATTTAAGGGCAACCAATTCTATCGCTTATGCAGGAAAAAGCCTAG
AATTTCGCACAAACAACCCTAGAAACTTTAATTTCAAAGGCGACAAAAGCTTAGATTACTTCTTGCTTGATGATATTATT
ACTACCGGAACCACCCTAAAAGAGGCTCTTAGTTATCTTAAAAATTTAGGCATAAAAGTGCATTTTGCTATCGCATTATG
CGATGTAAGTGAGTAG
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
81.152 |
100 |
0.812 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.126 |
100 |
0.361 |