Detailed information NTG0504585

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: IR208_RS09710
• Genome accession: NZ_CP064767
• Coordinates: 2010990..2013413 (-)
• Length: 807 a.a.
• NCBI ID: WP_071451944.1
• Uniprot ID: -
• Organism: Heyndrickxia coagulans strain BC01
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2005990..2018413

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IR208_RS09680 (IR208_09680)	-	2007333..2008424 (-)	1092	WP_014097920.1	AI-2E family transporter	-
IR208_RS09685 (IR208_09685)	-	2008686..2008817 (-)	132	WP_014097919.1	DUF3918 family protein	-
IR208_RS09690 (IR208_09690)	-	2008835..2009047 (-)	213	WP_035188196.1	hypothetical protein	-
IR208_RS09695 (IR208_09695)	-	2009207..2009647 (+)	441	WP_014097917.1	YndM family protein	-
IR208_RS09700 (IR208_09700)	-	2009686..2010036 (-)	351	WP_014097916.1	Lrp/AsnC family transcriptional regulator	-
IR208_RS17215	-	2010043..2010147 (-)	105	WP_014097915.1	AsnC family transcriptional regulator	-
IR208_RS09705 (IR208_09705)	-	2010479..2010823 (+)	345	Protein_1900	Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein	-
IR208_RS09710 (IR208_09710)	recD2	2010990..2013413 (-)	2424	WP_071451944.1	ATP-dependent RecD-like DNA helicase	Machinery gene
IR208_RS09715 (IR208_09715)	-	2013424..2014092 (-)	669	WP_014097911.1	tetratricopeptide repeat protein	-
IR208_RS09720 (IR208_09720)	mnmA	2014458..2015573 (-)	1116	WP_071451945.1	tRNA 2-thiouridine(34) synthase MnmA	-
IR208_RS09725 (IR208_09725)	-	2015589..2016734 (-)	1146	WP_017550594.1	cysteine desulfurase family protein	-
IR208_RS09730 (IR208_09730)	-	2016751..2017170 (-)	420	WP_017550595.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 90725.79 Da
• Isoelectric Point: 4.8827

>NTDB_id=504585 IR208_RS09710 WP_071451944.1 2010990..2013413(-) (recD2) [Heyndrickxia coagulans strain BC01]
MEKQHAMDLFQDEENFIKGKHLATIFHNEQNLYSVIRVRVEETNTGMEEKETVITGYFPRIHEQETYTFFGKMQEHPKFG
PQFQANRFQKDIPNTKQGVIEYLSSDLFNGIGKKTAERIVGVLGENAISKILENPAALDEVPKLAPEKAQLIRDTLVEHQ
GLERVMIGLAQYGFGPQIAMRIYQVYEDEALEKIAQNPYQLVDDIKGIGFGRADELGRQLGISGTHPHRIQAGCCYMLEM
ESMQHGHVYVLKEELAQDVKALLEEYQHVEIPMDLIENELVKLQEESKVIMEEDKVYLPSLYFSEKGIVSNIERIMSQTE
YAEQFPESEFLLALGSLEERIGVEYAPSQKEAIQKALMSPMMILTGGPGTGKTTVIKGIVELYGELHGVSLDPQTYKKDE
VFPIVLAAPTGRAAKRMAESTGLPAMTIHRLLGMTGMEDLDDSEERQVEGKLVIIDEMSMVDTWLANQLLKALPDEIQVI
MVGDEDQLPSVGPGQVLKDLLKSNAIPVVRLTDIYRQKDGSSIIELAHHVKNGRIPENIFQMQADRSFIRCSSGQVAEAV
EKVVKSAKRKGYTAKDIQVLAPMYRGPAGIDRLNSLLQNIFNPNENGARKELKHGDAVYRIGDKVLQLVNQPEHGVYNGD
IGEIVSLFTAKENTEKQDMLIVSFDGIEVTYTKPDFNQITLAYCCSIHKSQGSEFPVVILPVVRSYYRMLRRNLLYTAIT
RSKKILILLGEEPAFRMGVEREDDQKRKTTLCEKLAEALKTAQKEAGTETALSLTEENWDRVDPMIGMAGITPYTYAEEG
QTASQPD

Nucleotide

• Length: 2424 bp

>NTDB_id=504585 IR208_RS09710 WP_071451944.1 2010990..2013413(-) (recD2) [Heyndrickxia coagulans strain BC01]
TTGGAAAAACAGCATGCGATGGATTTATTCCAGGACGAGGAAAATTTTATAAAAGGAAAGCATCTCGCGACCATCTTCCA
TAACGAGCAAAATTTGTATTCCGTCATCCGTGTGCGGGTTGAAGAGACCAATACCGGGATGGAAGAAAAGGAAACGGTCA
TTACCGGCTATTTTCCGCGCATCCATGAGCAGGAAACGTACACCTTTTTTGGAAAAATGCAGGAACACCCGAAATTCGGC
CCCCAGTTCCAGGCAAATCGCTTCCAAAAAGACATCCCCAATACAAAGCAGGGCGTTATTGAGTATCTTTCCAGTGATTT
ATTTAACGGCATCGGCAAAAAAACGGCGGAGCGGATCGTTGGCGTGCTCGGTGAAAATGCGATCAGCAAAATATTGGAAA
ATCCCGCCGCCCTTGACGAAGTACCGAAACTGGCACCGGAAAAAGCGCAGCTGATCCGTGATACGTTAGTTGAACATCAG
GGGCTTGAACGTGTTATGATCGGGCTTGCGCAATACGGTTTCGGGCCGCAGATTGCGATGCGCATTTACCAGGTTTACGA
GGATGAGGCGCTCGAAAAAATTGCGCAAAATCCATACCAGCTCGTTGATGATATTAAAGGCATCGGTTTCGGGCGGGCCG
ATGAACTCGGCCGGCAGCTCGGCATCAGCGGGACGCATCCGCACCGCATCCAGGCCGGCTGCTGTTACATGCTGGAAATG
GAAAGCATGCAGCACGGTCATGTGTACGTCCTGAAAGAAGAACTTGCACAGGATGTCAAAGCCCTTTTGGAAGAATACCA
GCATGTTGAAATCCCGATGGACTTGATTGAAAATGAGCTGGTGAAACTTCAGGAAGAGAGCAAAGTCATCATGGAAGAAG
ACAAAGTCTATCTTCCGTCCCTCTATTTTTCGGAAAAAGGAATCGTTTCCAATATTGAGCGGATTATGTCGCAAACCGAG
TATGCGGAACAGTTCCCGGAATCTGAATTCCTGCTTGCTTTAGGCAGTCTTGAGGAACGGATCGGGGTCGAGTATGCCCC
GTCGCAAAAGGAAGCCATCCAAAAAGCGCTGATGAGTCCGATGATGATTTTAACGGGCGGGCCCGGCACAGGGAAAACAA
CGGTCATTAAAGGGATTGTGGAACTGTACGGTGAATTGCACGGCGTCTCGCTTGACCCGCAAACCTATAAAAAAGATGAG
GTATTTCCGATTGTTCTCGCGGCGCCGACAGGGAGGGCCGCGAAAAGAATGGCGGAGTCAACTGGTCTGCCGGCGATGAC
GATCCACCGCCTGCTCGGCATGACCGGCATGGAGGACCTGGACGATTCAGAGGAACGGCAAGTAGAAGGCAAGCTTGTCA
TCATTGATGAAATGTCGATGGTCGATACATGGCTTGCGAACCAGCTGTTAAAGGCGCTGCCGGATGAAATCCAAGTCATC
ATGGTTGGGGATGAAGACCAGCTGCCGTCCGTCGGTCCAGGCCAGGTGCTGAAAGATTTATTGAAATCGAACGCCATTCC
GGTTGTTAGGCTGACAGACATATACAGGCAGAAAGATGGTTCTTCGATTATTGAACTGGCCCACCATGTTAAAAATGGCC
GTATTCCGGAAAATATTTTTCAAATGCAGGCAGACCGTTCGTTTATCCGCTGTTCTTCCGGGCAGGTGGCGGAAGCGGTG
GAAAAAGTGGTGAAAAGCGCGAAACGGAAAGGCTATACGGCAAAAGACATTCAGGTGCTGGCGCCGATGTACAGGGGGCC
GGCCGGCATTGACCGTCTGAACAGCCTGTTGCAAAATATTTTTAATCCGAATGAGAACGGGGCCCGCAAAGAGCTGAAGC
ACGGGGACGCGGTTTACCGGATCGGCGATAAGGTACTGCAGCTTGTCAACCAGCCGGAACACGGGGTGTATAACGGCGAT
ATCGGCGAGATTGTCTCGCTTTTTACCGCAAAAGAAAATACGGAAAAACAAGATATGCTCATCGTTTCTTTTGATGGGAT
TGAAGTGACGTATACGAAGCCAGATTTCAATCAGATTACGCTTGCGTATTGCTGTTCGATCCATAAATCGCAAGGAAGCG
AGTTTCCGGTCGTAATTTTGCCGGTTGTCCGCAGCTATTACCGGATGCTGCGCCGAAACTTGCTGTATACGGCGATTACA
AGGAGCAAAAAAATTTTAATTCTGCTTGGCGAAGAACCGGCTTTCCGGATGGGTGTGGAAAGGGAAGATGACCAAAAGCG
GAAGACGACACTGTGTGAAAAACTGGCTGAAGCATTAAAAACGGCACAAAAAGAGGCAGGGACGGAGACAGCCCTGTCCT
TAACAGAAGAAAATTGGGACCGGGTCGACCCGATGATTGGCATGGCGGGCATTACCCCGTACACGTACGCAGAAGAAGGA
CAGACTGCGTCCCAACCGGATTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-664)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-249)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (682-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	60.648	99.504	0.603