Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   IT773_RS05175 Genome accession   NZ_CP064761
Coordinates   1089680..1090948 (+) Length   422 a.a.
NCBI ID   WP_195701952.1    Uniprot ID   -
Organism   Companilactobacillus futsaii strain Chongqingii CQ16Z1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1084680..1095948
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IT773_RS05145 rpsB 1084897..1085703 (+) 807 WP_057815029.1 30S ribosomal protein S2 -
  IT773_RS05150 tsf 1085774..1086649 (+) 876 WP_057815027.1 translation elongation factor Ts -
  IT773_RS05155 pyrH 1086818..1087552 (+) 735 WP_010019489.1 UMP kinase -
  IT773_RS05160 frr 1087542..1088099 (+) 558 WP_057815025.1 ribosome recycling factor -
  IT773_RS05165 - 1088103..1088846 (+) 744 WP_057815022.1 isoprenyl transferase -
  IT773_RS05170 - 1088865..1089659 (+) 795 WP_057815020.1 phosphatidate cytidylyltransferase -
  IT773_RS05175 eeP 1089680..1090948 (+) 1269 WP_195701952.1 RIP metalloprotease RseP Regulator
  IT773_RS05180 - 1090963..1092672 (+) 1710 WP_057815015.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 45828.44 Da        Isoelectric Point: 9.6880

>NTDB_id=504539 IT773_RS05175 WP_195701952.1 1089680..1090948(+) (eeP) [Companilactobacillus futsaii strain Chongqingii CQ16Z1]
MTAIITFIIVFGILVIVHEFGHYYAAKKSGILVREFSVGMGPKIVAYRKNHTTYTLRLLPLGGYVRMAGAQEDDSEIQPG
TMASLVINDDDKVTKIITSSKVYDANAVPVQISKADLVDDLIIEGYENGDETVTKKYSVDHDATIVEEDGTEVQIAPRDV
QLQSVSVWKRMITNFAGPFNNFILAIVAAIIAAFMMGSVGTGSNQLGSIQKDSVAQKAGLKANDKILSINGKKTASWTDL
SENIQNSPGKKLTMKVQSGKKVETIKVTPKTVKSSGQSYGLIGIMQKTDSSAMAKIKYGFIYSWSTSLTIFHALGKMVSG
GFSINQLSGPVGIYSMTSKVASTGLINIIFFTSMLSMNLGIVNLIPIPALDGGKILLNIVEAIRRKPIPEQYENVITLIG
VGILVLLMIAVTWNDIQRFFIK

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=504539 IT773_RS05175 WP_195701952.1 1089680..1090948(+) (eeP) [Companilactobacillus futsaii strain Chongqingii CQ16Z1]
ATGACCGCGATAATTACATTTATAATCGTTTTTGGAATTTTAGTAATTGTCCATGAATTTGGACACTATTATGCTGCAAA
AAAATCAGGAATCTTGGTTCGTGAGTTTTCTGTTGGTATGGGACCAAAAATCGTCGCTTACCGCAAAAATCATACGACCT
ATACTTTGAGACTATTGCCTTTGGGTGGTTATGTCCGCATGGCTGGTGCGCAAGAAGATGATTCTGAAATTCAACCAGGA
ACGATGGCATCATTAGTAATTAATGATGACGATAAAGTAACAAAAATTATAACTTCAAGTAAGGTTTATGATGCAAACGC
GGTTCCAGTTCAAATCTCTAAAGCTGATCTTGTTGATGATTTAATAATCGAAGGATACGAAAATGGTGATGAAACGGTCA
CTAAGAAGTATTCTGTTGATCATGATGCAACGATTGTTGAAGAAGATGGAACAGAAGTGCAGATTGCACCTCGTGACGTT
CAATTGCAATCAGTTTCTGTCTGGAAGCGAATGATCACAAACTTTGCTGGTCCATTTAACAATTTTATATTAGCAATCGT
GGCTGCTATTATTGCTGCCTTTATGATGGGATCGGTTGGGACTGGTTCAAATCAATTAGGTAGTATTCAAAAAGATTCAG
TAGCTCAAAAAGCTGGTCTAAAAGCCAACGATAAAATTTTAAGTATTAACGGGAAGAAAACTGCTTCTTGGACTGATTTA
TCAGAAAATATTCAAAATAGTCCTGGTAAAAAATTAACGATGAAAGTTCAATCTGGTAAAAAGGTTGAAACAATCAAAGT
AACGCCTAAGACAGTTAAATCTTCAGGTCAAAGTTATGGCTTGATCGGTATTATGCAAAAAACCGACTCTTCTGCTATGG
CCAAGATCAAATATGGTTTTATTTATAGCTGGAGCACTTCGTTAACAATTTTCCACGCTTTAGGAAAGATGGTTTCAGGT
GGGTTTAGCATTAATCAATTATCTGGTCCGGTAGGAATTTATTCGATGACTTCTAAAGTCGCCTCAACCGGTTTGATCAA
TATTATTTTCTTCACATCGATGCTGTCAATGAACCTCGGAATCGTCAATTTGATTCCAATTCCAGCTTTGGATGGTGGAA
AAATCTTGTTAAATATTGTTGAAGCAATTAGAAGAAAACCGATTCCAGAACAATATGAAAATGTGATTACCTTAATTGGG
GTCGGAATCTTAGTTCTATTAATGATTGCCGTAACCTGGAATGATATCCAGCGCTTCTTTATAAAATAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-407)

PDZ domain (PDZ_6)

(208-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.18

100

0.498
  eeP Streptococcus thermophilus LMD-9

48.946

100

0.495