Detailed information NTG0050451

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: HCD_RS04245
• Genome accession: NC_017735
• Coordinates: 873885..875204 (+)
• Length: 439 a.a.
• NCBI ID: WP_014659358.1
• Uniprot ID: -
• Organism: Helicobacter cetorum MIT 99-5656
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 868885..880204

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HCD_RS04230 (HCD_04170)	-	869718..871121 (+)	1404	WP_014659355.1	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	-
HCD_RS04235 (HCD_04175)	-	871129..872343 (+)	1215	WP_014659356.1	restriction endonuclease subunit S	-
HCD_RS04240 (HCD_04180)	-	872431..873888 (+)	1458	WP_014659357.1	replicative DNA helicase	-
HCD_RS04245 (HCD_04185)	comEC/comE3	873885..875204 (+)	1320	WP_014659358.1	ComEC/Rec2 family competence protein	Machinery gene
HCD_RS04250 (HCD_04190)	-	875215..875760 (+)	546	WP_014659359.1	DUF502 domain-containing protein	-
HCD_RS04255 (HCD_04195)	mqnP	875785..876645 (+)	861	WP_227624876.1	menaquinone biosynthesis prenyltransferase MqnP	-
HCD_RS04260 (HCD_04200)	-	876638..877132 (+)	495	WP_014659361.1	hypothetical protein	-
HCD_RS04265 (HCD_04205)	-	877145..877648 (+)	504	WP_014659362.1	hypothetical protein	-
HCD_RS04270 (HCD_04210)	-	877645..878448 (+)	804	WP_041594824.1	phosphatidylserine decarboxylase	-
HCD_RS04275 (HCD_04215)	nadA	878438..879448 (+)	1011	WP_014659364.1	quinolinate synthase NadA	-

Sequence

Protein

• Length: 439 a.a.
• Molecular weight: 51021.16 Da
• Isoelectric Point: 9.8662

>NTDB_id=50451 HCD_RS04245 WP_014659358.1 873885..875204(+) (comEC/comE3) [Helicobacter cetorum MIT 99-5656]
MKTTSFKGAFDLLTTPKETLVCLVILGLLFVFNLYLEYSHYKKLDFSKPMSFNAQILLQYSKMKNQKSYFVLKLKSAQGA
IFYTTTKEPLKNLQYRYARFFGKVMPCSFLESLKSCYFHTYSFSLLHKQDFKSYLRNFIDSFHSNNLISNLYRALFLGDS
LNKDLRDRANSLGVNHLLAISGFHLGILSATLYFLLSLFYKPLQNRYFPYRNAFFDIGVLVWVFMLGYLVLLDFLPSFFR
AFLMGLLGFLACFFGIRLLSFKLLILACLIAIALFPKLLFSVGFLLSVCGVWYIFLFFRHAKTFFKNDSFLMRFFQAISL
SILVFFNMLIIVHAFFPMFSPYQLFSIPLGFVFVVFFPLGLFLHIVNLGHLLDNFLSTPLEIPTISMHTPLWLLGAYLCL
TLLSVRFFKAYLIMNILSVGFFLYCCYQYIIMPSLIVGN

Nucleotide

• Length: 1320 bp

>NTDB_id=50451 HCD_RS04245 WP_014659358.1 873885..875204(+) (comEC/comE3) [Helicobacter cetorum MIT 99-5656]
TTGAAAACAACATCTTTTAAGGGGGCGTTTGATTTGCTTACAACCCCCAAAGAAACTTTAGTGTGTTTGGTTATCCTAGG
CTTATTGTTTGTTTTTAATCTCTATTTAGAATACTCTCATTACAAAAAACTTGATTTTTCAAAGCCCATGAGTTTTAACG
CTCAAATTTTATTGCAATACTCTAAGATGAAAAATCAAAAATCCTATTTCGTGCTAAAGCTCAAATCCGCTCAAGGCGCA
ATTTTTTACACCACTACAAAAGAGCCTTTAAAAAATCTTCAATACCGCTATGCGCGATTTTTTGGTAAGGTCATGCCTTG
CTCGTTTTTAGAGTCTTTAAAATCATGTTATTTTCACACCTATTCTTTTTCTTTATTGCATAAGCAAGATTTTAAATCCT
ACTTACGCAATTTTATTGATAGCTTTCATTCAAACAACCTCATCAGCAATTTGTATCGGGCGTTATTTTTGGGCGATAGT
CTTAATAAAGATTTAAGAGATAGGGCTAATTCTTTAGGCGTTAACCACCTACTAGCTATTAGTGGGTTTCATTTAGGTAT
TTTGAGTGCCACACTTTATTTTCTTTTGTCTCTCTTTTATAAGCCCTTACAAAATCGCTATTTTCCTTACAGAAACGCTT
TTTTTGATATAGGGGTTTTAGTCTGGGTTTTTATGCTAGGTTATTTAGTGCTATTAGACTTTTTGCCATCTTTTTTTAGG
GCATTTTTAATGGGCTTATTAGGGTTTTTAGCATGCTTTTTTGGCATAAGGTTACTAAGTTTCAAGCTCTTAATTTTAGC
GTGTTTGATAGCTATTGCCCTATTCCCTAAATTGCTTTTTAGTGTGGGATTTTTGCTCTCAGTTTGTGGGGTGTGGTATA
TCTTTTTATTTTTTAGACATGCTAAAACTTTTTTTAAAAACGATTCTTTTTTAATGCGATTTTTTCAAGCCATAAGCTTA
AGTATTTTGGTGTTTTTTAACATGCTTATCATTGTGCATGCCTTTTTTCCTATGTTTTCGCCCTATCAACTATTTAGCAT
TCCTTTAGGCTTTGTTTTTGTGGTGTTTTTTCCTTTGGGCTTGTTCTTGCATATAGTCAATTTGGGGCATCTATTAGATA
ATTTTTTAAGCACGCCTTTAGAAATTCCTACCATTTCCATGCATACACCTTTGTGGCTTTTAGGGGCGTATTTATGCCTA
ACGCTTCTTAGCGTTCGCTTTTTTAAGGCTTATCTAATAATGAATATTTTAAGCGTTGGCTTTTTCTTGTATTGTTGCTA
TCAATATATTATAATGCCTAGTTTAATTGTAGGGAATTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (158-391)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	78.995	99.772	0.788