Detailed information NTG0504246

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KQ217_RS14220
• Genome accession: NZ_CP076706
• Coordinates: 2921409..2922434 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli O170:H18 strain CFIAFB20120266
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2916409..2927434

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KQ217_RS14190 (KQ217_14190)	zapB	2916493..2916738 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
KQ217_RS14195 (KQ217_14195)	rraA	2916823..2917308 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KQ217_RS14200 (KQ217_14200)	menA	2917401..2918327 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KQ217_RS14205 (KQ217_14205)	hslU	2918394..2919725 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
KQ217_RS14210 (KQ217_14210)	hslV	2919735..2920265 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KQ217_RS14215 (KQ217_14215)	ftsN	2920358..2921317 (-)	960	WP_000068834.1	cell division protein FtsN	-
KQ217_RS14220 (KQ217_14220)	cytR	2921409..2922434 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KQ217_RS14225 (KQ217_14225)	priA	2922590..2924788 (-)	2199	WP_216803434.1	primosomal protein N'	Machinery gene
KQ217_RS14230 (KQ217_14230)	rpmE	2924991..2925203 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
KQ217_RS14235 (KQ217_14235)	yiiX	2925264..2925872 (-)	609	WP_088170576.1	YiiX family permuted papain-like enzyme	-
KQ217_RS14240 (KQ217_14240)	metJ	2925932..2926249 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=504246 KQ217_RS14220 WP_000644904.1 2921409..2922434(-) (cytR) [Escherichia coli O170:H18 strain CFIAFB20120266]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=504246 KQ217_RS14220 WP_000644904.1 2921409..2922434(-) (cytR) [Escherichia coli O170:H18 strain CFIAFB20120266]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCTCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628