Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   KRG72_RS04575 Genome accession   NZ_CP076703
Coordinates   903880..904542 (-) Length   220 a.a.
NCBI ID   WP_258256170.1    Uniprot ID   -
Organism   Streptococcus equinus strain S1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 898880..909542
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KRG72_RS04555 (KRG72_04560) - 899065..900450 (+) 1386 WP_258256164.1 ATP-binding cassette domain-containing protein -
  KRG72_RS04560 (KRG72_04565) xerS 900990..902060 (+) 1071 WP_258256167.1 tyrosine recombinase XerS Machinery gene
  KRG72_RS04565 (KRG72_04570) - 902172..902852 (-) 681 WP_258256168.1 helix-turn-helix transcriptional regulator -
  KRG72_RS04570 (KRG72_04575) - 902936..903883 (-) 948 WP_258256169.1 HAMP domain-containing sensor histidine kinase -
  KRG72_RS04575 (KRG72_04580) braR 903880..904542 (-) 663 WP_258256170.1 response regulator transcription factor Regulator
  KRG72_RS04580 (KRG72_04585) - 904644..906620 (-) 1977 WP_074867517.1 FtsX-like permease family protein -
  KRG72_RS04585 (KRG72_04590) - 906622..907374 (-) 753 WP_074560137.1 ABC transporter ATP-binding protein -
  KRG72_RS04590 (KRG72_04595) - 907819..908640 (-) 822 WP_258256173.1 sugar phosphate isomerase/epimerase -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 25584.40 Da        Isoelectric Point: 4.9684

>NTDB_id=504061 KRG72_RS04575 WP_258256170.1 903880..904542(-) (braR) [Streptococcus equinus strain S1]
MKQGKIYIVEDDNTIVTLLKQHLSKVYDVFNVNNFRAIKQEIEEIKPDLILMDITLPYFNGFYWTTEIRKTMTLPIIFIS
SSDDEMDTVMALNMGGDDFISKPFSLTILDAKISAFLRRAYQFTSDNYQLDEFSLSREGILSNGSKQINLSPTENKILSI
LFEHQNQVVPKEDLLEKLWENESFIDQNTLSVNMTRLRKKVQPLEFDRIHTVRGVGYLLK

Nucleotide


Download         Length: 663 bp        

>NTDB_id=504061 KRG72_RS04575 WP_258256170.1 903880..904542(-) (braR) [Streptococcus equinus strain S1]
ATGAAACAAGGAAAAATTTATATCGTAGAAGATGACAACACCATTGTAACTCTATTAAAACAACATTTAAGCAAAGTTTA
TGATGTCTTTAACGTTAATAATTTTCGTGCGATTAAGCAAGAGATCGAAGAAATTAAGCCTGATTTGATTTTGATGGATA
TCACTTTGCCTTATTTCAATGGTTTTTATTGGACAACAGAAATTCGAAAAACGATGACGTTGCCAATCATATTTATCTCA
TCCAGTGATGATGAAATGGATACCGTTATGGCACTTAATATGGGAGGAGATGATTTCATTTCCAAACCCTTCTCATTGAC
TATTTTAGATGCCAAGATATCTGCTTTTTTGCGTAGAGCTTATCAATTCACTTCCGATAATTATCAGCTTGATGAGTTTT
CATTATCCCGTGAAGGAATCCTGTCAAATGGCAGCAAACAGATTAACCTTTCGCCAACAGAAAATAAAATTCTTAGCATT
TTATTCGAGCACCAAAATCAAGTGGTTCCAAAAGAAGATTTGCTTGAAAAGCTGTGGGAAAATGAGAGTTTTATTGACCA
AAACACGCTAAGTGTCAACATGACACGCTTACGTAAAAAAGTTCAACCATTAGAATTTGATCGCATTCATACCGTGAGAG
GAGTCGGTTATCTTTTAAAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.248

99.091

0.468
  vicR Streptococcus mutans UA159

34.783

100

0.364