Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE1441   Type   Regulator
Locus tag   KPG50_RS06845 Genome accession   NZ_CP076504
Coordinates   1322559..1323212 (+) Length   217 a.a.
NCBI ID   WP_011049930.1    Uniprot ID   -
Organism   Campylobacter jejuni strain R18.1301     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1317559..1328212
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KPG50_RS06795 (KPG50_06795) - 1317574..1317807 (-) 234 WP_044261583.1 helix-turn-helix transcriptional regulator -
  KPG50_RS06800 (KPG50_06800) - 1317821..1318222 (-) 402 WP_044261584.1 hypothetical protein -
  KPG50_RS06805 (KPG50_06805) - 1318227..1318457 (-) 231 WP_002787283.1 hypothetical protein -
  KPG50_RS06810 (KPG50_06810) - 1318423..1318686 (-) 264 WP_044779014.1 hypothetical protein -
  KPG50_RS06815 (KPG50_06815) - 1318696..1319079 (-) 384 WP_044261586.1 hypothetical protein -
  KPG50_RS06820 (KPG50_06820) - 1319152..1319883 (-) 732 WP_216177257.1 phage regulatory protein/antirepressor Ant -
  KPG50_RS06825 (KPG50_06825) - 1320314..1320598 (-) 285 WP_052949217.1 hypothetical protein -
  KPG50_RS06830 (KPG50_06830) - 1320595..1320798 (-) 204 WP_052775426.1 hypothetical protein -
  KPG50_RS06835 (KPG50_06835) - 1321003..1321656 (+) 654 WP_002870336.1 hypothetical protein -
  KPG50_RS06840 (KPG50_06840) - 1321891..1322553 (+) 663 WP_002870274.1 S24/S26 family peptidase -
  KPG50_RS06845 (KPG50_06845) CJE1441 1322559..1323212 (+) 654 WP_011049930.1 DNA/RNA non-specific endonuclease Regulator
  KPG50_RS06850 (KPG50_06850) - 1323229..1323510 (+) 282 WP_002870263.1 PLDc N-terminal domain-containing protein -
  KPG50_RS06855 (KPG50_06855) - 1323524..1323721 (-) 198 WP_002913413.1 hypothetical protein -
  KPG50_RS06860 (KPG50_06860) - 1323639..1324058 (-) 420 WP_002870261.1 hypothetical protein -
  KPG50_RS06865 (KPG50_06865) - 1324287..1324745 (-) 459 WP_002858146.1 DUF5675 family protein -
  KPG50_RS06870 (KPG50_06870) - 1324794..1326077 (-) 1284 WP_216177441.1 hypothetical protein -
  KPG50_RS06875 (KPG50_06875) - 1326074..1326448 (-) 375 WP_216177260.1 DUF1353 domain-containing protein -
  KPG50_RS06880 (KPG50_06880) - 1326441..1326824 (-) 384 WP_002869963.1 hypothetical protein -
  KPG50_RS06885 (KPG50_06885) - 1326821..1327456 (-) 636 WP_216177263.1 DUF4376 domain-containing protein -
  KPG50_RS06890 (KPG50_06890) - 1327469..1327918 (-) 450 WP_216177265.1 hypothetical protein -

Sequence

Protein


Download         Length: 217 a.a.        Molecular weight: 25531.02 Da        Isoelectric Point: 9.8742

>NTDB_id=502864 KPG50_RS06845 WP_011049930.1 1322559..1323212(+) (CJE1441) [Campylobacter jejuni strain R18.1301]
MKKLIILSLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYINCYDYSLKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIKNNIAIPSSYTKILKGDNFKECYQVPNHDVENENLRIYKVKCDNF

Nucleotide


Download         Length: 654 bp        

>NTDB_id=502864 KPG50_RS06845 WP_011049930.1 1322559..1323212(+) (CJE1441) [Campylobacter jejuni strain R18.1301]
ATGAAAAAACTTATAATCTTATCTTTATTATCCACTCTAGCTTTTGCTGATTATACACAATACAAACCAAGCGAAGATTT
TGCCAAGTATTTTACTAAACAAAACTGCTCACAAGTTTTGGATAAATTTTATTATATTAATTGTTATGATTATTCTTTAA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATTCCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTACGACAGGGGACACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGCAACATTACTCCACAAAATCCAC
AAATCAATCAAAGAGTTTGGAATAAAATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGACAATAATCCACAAAGAATAAAAAACAATATTGCTATTCCAAGCTCTTACACTAAGATTTTAAA
AGGTGATAATTTTAAAGAATGTTACCAAGTGCCTAATCACGATGTAGAAAATGAGAATTTAAGAATATATAAAGTAAAAT
GTGACAATTTTTAA

Domains

Predicted by InterProScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(27-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE1441 Campylobacter jejuni RM1221

100

100

1
  CJE0566 Campylobacter jejuni RM1221

91.163

99.078

0.903