Detailed information NTG0502685

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: KME66_RS23750
• Genome accession: NZ_CP076457
• Coordinates: 5388151..5389449 (+)
• Length: 432 a.a.
• NCBI ID: WP_073216709.1
• Uniprot ID: -
• Organism: Streptomyces sp. YPW6
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5383151..5394449

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KME66_RS23720 (KME66_23720)	-	5384181..5384357 (+)	177	WP_216325707.1	hypothetical protein	-
KME66_RS23735 (KME66_23735)	tig	5384927..5386324 (+)	1398	WP_216325710.1	trigger factor	-
KME66_RS23740 (KME66_23740)	-	5386622..5387227 (+)	606	WP_178378930.1	ATP-dependent Clp protease proteolytic subunit	-
KME66_RS23745 (KME66_23745)	clpP	5387310..5387993 (+)	684	WP_006124415.1	ATP-dependent Clp protease proteolytic subunit	Regulator
KME66_RS23750 (KME66_23750)	clpX	5388151..5389449 (+)	1299	WP_073216709.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
KME66_RS23755 (KME66_23755)	-	5389524..5390561 (-)	1038	WP_216325713.1	hypothetical protein	-
KME66_RS23760 (KME66_23760)	-	5390898..5393519 (+)	2622	WP_216325716.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47287.11 Da
• Isoelectric Point: 4.7838

>NTDB_id=502685 KME66_RS23750 WP_073216709.1 5388151..5389449(+) (clpX) [Streptomyces sp. YPW6]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGAGREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKVEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
PDVVRDNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=502685 KME66_RS23750 WP_073216709.1 5388151..5389449(+) (clpX) [Streptomyces sp. YPW6]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACGA
GCGAGGTGCGCTGGGAAGAGCTTCCCAAGCCCCGCGAGATCTACGAGTTCCTGGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGGGAGAACGGCGGCGGCGCCGGTCG
TGAGGACGCGATCGAGCTCGCCAAGTCGAACATCCTCCTGCTGGGCCCCACGGGTTCCGGTAAGACGCTTCTCGCCCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCGATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCCTCGATCACCCGCGATGTCTCCGGCGAGGGCGTGCAGCAGGCCC
TGCTGAAAATCCTGGAGGGCACCACCGCCTCCGTCCCGCCGCAGGGCGGACGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCTCCGGCCTGGAGAAGATCATCGAGTCCCGGGCCGGTGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGGTGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTCCCCGTGCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTCCAGATCCTCGTCGAGCCGCGCAACGCCCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCCATCCTGCGCCAGACCGGCGCCCGCGGCCTAC
GGGCGATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
CCGGACGTGGTCCGCGACAACGTCAACCCCACGCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGGCGGCCG
CCACGAGAAGTCCGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.126	95.37	0.516