Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   KME66_RS19085 Genome accession   NZ_CP076457
Coordinates   4293691..4294815 (-) Length   374 a.a.
NCBI ID   WP_073225728.1    Uniprot ID   -
Organism   Streptomyces sp. YPW6     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4288691..4299815
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KME66_RS19060 (KME66_19060) cseB 4288833..4289549 (-) 717 WP_216324020.1 two-component system response regulator CseB -
  KME66_RS19065 (KME66_19065) - 4289717..4290364 (-) 648 WP_216329461.1 hypothetical protein -
  KME66_RS19070 (KME66_19070) - 4290469..4291131 (-) 663 WP_216324023.1 SigE family RNA polymerase sigma factor -
  KME66_RS19075 (KME66_19075) - 4291393..4292307 (-) 915 WP_216324027.1 A/G-specific adenine glycosylase -
  KME66_RS19080 (KME66_19080) - 4292612..4293346 (+) 735 WP_216324030.1 hypothetical protein -
  KME66_RS19085 (KME66_19085) disA 4293691..4294815 (-) 1125 WP_073225728.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  KME66_RS19090 (KME66_19090) radA/sms 4294896..4296317 (-) 1422 WP_073226325.1 DNA repair protein RadA Machinery gene
  KME66_RS19095 (KME66_19095) - 4296551..4298485 (+) 1935 WP_216324033.1 hypothetical protein -
  KME66_RS19100 (KME66_19100) - 4298838..4299701 (-) 864 WP_073225724.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40396.35 Da        Isoelectric Point: 4.9406

>NTDB_id=502674 KME66_RS19085 WP_073225728.1 4293691..4294815(-) (disA) [Streptomyces sp. YPW6]
MAANDRATTPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDRTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKACGFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDSLTHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=502674 KME66_RS19085 WP_073225728.1 4293691..4294815(-) (disA) [Streptomyces sp. YPW6]
GTGGCAGCCAACGACCGGGCGACGACGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGCT
GAGCGCGGTCGCGCCCGGTATGGCCCTGCGGGACGGCCTGGAGCGCATTCTGCGCGGCAATACCGGCGGCCTGATCGTGC
TGGGCATGGACCGGACCGTCGAGTCGATGTGCACCGGCGGGTTCGTGCTGGACGTGGAGTTCACGGCGACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGAGCGCTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTCCC
GGACGCGTCGATCCCCACGGAGGAGACGGGCACCCGGCACCGTACGGCGGACCGGGTCTCCAAGGCGTGCGGCTTCCCCG
TCGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTGTCCCGGGCCAACCAGGCGCTCGCCACGCTGGAGCGGTACAAGCTGCGTCTCGACGAGGTCGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGACGGCGGTGGCGCAGCGGCTGGAGATGGTGCGGCGGATCG
CGACGGAGATCGCGGAGTACGTGGTCGAGCTCGGCACCGACGGACGGCTGCTCTCCCTCCAGCTCGACGAGCTGATCGCG
GGGGTGGAGCCGGAGCGGGAGCTGGTCGTCCGGGACTACGTCCCCGAGCCGACGGCGAAACGGTCGCGCACGGTGGCCGA
GGCACTGACCGAGCTGGACTCCCTGACCCACACGGAGCTGCTGGAGCTGCCGGTGGTGGCGCGGGCGCTGGGCTACAGCG
GCTCGCCGGAGACGCTGGACTCGGCGGTGTCGCCGCGGGGCTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGGGGGCTGCAGAAGCTGCTGGCCGCCAGCGTGGACGATCTCCAGGCGGTGGA
CGGGGTCGGCGAGGCGCGGGCGCGGAGTGTTCGCGAGGGGCTGTCACGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433