Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   KMZ16_RS16275 Genome accession   NZ_CP076445
Coordinates   3123793..3124656 (-) Length   287 a.a.
NCBI ID   WP_043858576.1    Uniprot ID   A8D459
Organism   Bacillus subtilis subsp. subtilis strain ps4100     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3118793..3129656
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KMZ16_RS16240 (KMZ16_16090) mrpE 3118961..3119437 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  KMZ16_RS16245 (KMZ16_16095) mrpF 3119437..3119721 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  KMZ16_RS16250 (KMZ16_16100) mnhG 3119705..3120079 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  KMZ16_RS16255 (KMZ16_16105) yuxO 3120118..3120498 (-) 381 WP_015714624.1 hotdog fold thioesterase -
  KMZ16_RS16260 (KMZ16_16110) comA 3120517..3121161 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  KMZ16_RS16265 (KMZ16_16115) comP 3121242..3123554 (-) 2313 WP_069703660.1 histidine kinase Regulator
  KMZ16_RS16270 (KMZ16_16120) comX 3123570..3123791 (-) 222 WP_014480704.1 competence pheromone ComX -
  KMZ16_RS16275 (KMZ16_16125) comQ 3123793..3124656 (-) 864 WP_043858576.1 polyprenyl synthetase family protein Regulator
  KMZ16_RS16280 (KMZ16_16130) degQ 3124842..3124982 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  KMZ16_RS16285 - 3125204..3125266 (+) 63 Protein_3148 hypothetical protein -
  KMZ16_RS16290 (KMZ16_16135) - 3125444..3125812 (+) 369 WP_017695529.1 hypothetical protein -
  KMZ16_RS16295 (KMZ16_16140) pdeH 3125788..3127017 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  KMZ16_RS16300 (KMZ16_16145) pncB 3127154..3128626 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  KMZ16_RS16305 (KMZ16_16150) pncA 3128642..3129193 (-) 552 WP_038828671.1 cysteine hydrolase family protein -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32760.38 Da        Isoelectric Point: 4.9534

>NTDB_id=502549 KMZ16_RS16275 WP_043858576.1 3123793..3124656(-) (comQ) [Bacillus subtilis subsp. subtilis strain ps4100]
MKEIVDENILNEDLKVKLISFIEEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGECNETVEEYSRYLGVVEQIANDHYGLYYPNNNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=502549 KMZ16_RS16275 WP_043858576.1 3123793..3124656(-) (comQ) [Bacillus subtilis subsp. subtilis strain ps4100]
ATGAAGGAGATTGTAGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCGAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTACTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAGGTAATAGGCTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATGTAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTGTAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACAATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(46-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8D459

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

44.286

97.561

0.432