Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   KNZ81_RS22815 Genome accession   NZ_CP076385
Coordinates   5174644..5175327 (-) Length   227 a.a.
NCBI ID   WP_023419622.1    Uniprot ID   -
Organism   Streptomyces sp. G11C(2021)     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 5169644..5180327
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KNZ81_RS22795 (KNZ81_22650) - 5170244..5170741 (+) 498 WP_215221080.1 MerR family transcriptional regulator -
  KNZ81_RS22800 (KNZ81_22655) - 5170856..5171926 (+) 1071 WP_215221081.1 aldo/keto reductase -
  KNZ81_RS22805 (KNZ81_22660) - 5172053..5173270 (-) 1218 WP_037787434.1 acyltransferase -
  KNZ81_RS22810 (KNZ81_22665) - 5173267..5174358 (-) 1092 WP_023422853.1 alpha/beta hydrolase -
  KNZ81_RS22815 (KNZ81_22670) vraR 5174644..5175327 (-) 684 WP_023419622.1 response regulator transcription factor Regulator
  KNZ81_RS22820 (KNZ81_22675) - 5175324..5176721 (-) 1398 WP_215221082.1 sensor histidine kinase -
  KNZ81_RS22825 (KNZ81_22680) - 5176927..5177799 (-) 873 WP_215221083.1 DUF4429 domain-containing protein -
  KNZ81_RS22830 (KNZ81_22685) - 5177876..5179114 (-) 1239 WP_033948547.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 24753.52 Da        Isoelectric Point: 6.6555

>NTDB_id=502332 KNZ81_RS22815 WP_023419622.1 5174644..5175327(-) (vraR) [Streptomyces sp. G11C(2021)]
MSIRVIIVDDQGMVRAGFAALLSAQSDIDVVGEAADGRSGIEVSRKTHPDIVLMDVRMPEMDGLTATRELLSPEPGTAHR
PKVIMLTTFDVDDYVYEALHAGASGFLLKDSPPASLVSAVRVIHGGNALLDPAVTRRFIEDIVRRRPRPRRDPRLQLNGL
TPRETEVLELVARGLSNLEIAEQLVLAEQTVKTHISRILAKLGIRDRAQAVIAAYESGLVKPGDSVR

Nucleotide


Download         Length: 684 bp        

>NTDB_id=502332 KNZ81_RS22815 WP_023419622.1 5174644..5175327(-) (vraR) [Streptomyces sp. G11C(2021)]
ATGAGCATCCGTGTGATCATCGTCGACGACCAGGGCATGGTGCGGGCCGGTTTCGCCGCGCTGCTGTCCGCCCAGTCGGA
CATCGACGTCGTCGGCGAGGCCGCGGACGGGCGGAGCGGTATCGAGGTGAGCCGCAAGACCCACCCCGACATCGTGCTGA
TGGATGTACGGATGCCGGAGATGGACGGCCTGACGGCGACCCGGGAGTTGCTGAGCCCGGAGCCGGGGACGGCCCATCGT
CCGAAGGTCATCATGCTGACCACCTTCGACGTGGACGACTACGTGTACGAGGCGCTGCACGCCGGAGCCTCCGGCTTCCT
GCTGAAGGACTCGCCGCCGGCCAGCCTGGTCTCGGCGGTCCGCGTCATCCACGGCGGGAACGCGCTGCTCGACCCCGCCG
TGACCCGCCGCTTCATCGAGGACATCGTCCGGCGGCGCCCACGTCCCCGCCGCGACCCCCGTCTGCAGTTGAACGGCCTC
ACACCGCGTGAGACCGAGGTACTGGAGCTGGTGGCCCGCGGGCTCTCCAATCTGGAGATCGCCGAGCAACTCGTCCTCGC
CGAACAGACGGTGAAGACCCACATCAGCCGCATCCTCGCCAAGCTCGGCATCCGCGACCGCGCCCAGGCGGTCATCGCCG
CCTACGAATCCGGGCTGGTCAAGCCCGGTGACAGCGTGCGCTGA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, luxR family (GerE)

(160-213)

Response regulator receiver domain (Response_reg)

(5-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

41.629

97.357

0.405
  degU Bacillus subtilis subsp. subtilis str. 168

36.245

100

0.366