Detailed information NTG0502331

Bioinformatically predicted

Overview

• Name: ccrA
• Type: Machinery gene
• Locus tag: HWI54_RS00225
• Genome accession: NZ_CP064489
• Coordinates: 51247..52596 (-)
• Length: 449 a.a.
• NCBI ID: WP_000815640.1
• Uniprot ID: -
• Organism: Staphylococcus epidermidis strain UMCG381
• Function: promote SCCmec transfer (predicted from homology) Homologous recombination

Genomic Context

Location: 46247..57596

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HWI54_RS00205 (HWI54_00215)	-	47806..48312 (-)	507	WP_001092194.1	DUF1643 domain-containing protein	-
HWI54_RS00210 (HWI54_00220)	-	48327..48638 (-)	312	WP_000700851.1	DUF960 family protein	-
HWI54_RS00215 (HWI54_00225)	-	48725..49075 (-)	351	WP_000849672.1	SAUGI family uracil-DNA glycosylase inhibitor	-
HWI54_RS00220 (HWI54_00230)	ccrB	49597..51225 (-)	1629	WP_001186608.1	cassette chromosome recombinase CcrB	Machinery gene
HWI54_RS00225 (HWI54_00235)	ccrA	51247..52596 (-)	1350	WP_000815640.1	cassette chromosome recombinase CcrA	Machinery gene
HWI54_RS00230 (HWI54_00240)	cch1	52830..54623 (-)	1794	WP_000079473.1	cassette chromosome replicative helicase	-
HWI54_RS00235 (HWI54_00245)	ssb	54623..54919 (-)	297	WP_000273823.1	cassette chromosome ssDNA-binding protein	-
HWI54_RS00240 (HWI54_00250)	-	55112..56158 (-)	1047	WP_001042023.1	hypothetical protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 52663.34 Da
• Isoelectric Point: 9.9639

>NTDB_id=502331 HWI54_RS00225 WP_000815640.1 51247..52596(-) (ccrA) [Staphylococcus epidermidis strain UMCG381]
MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQITQLIQQGQCDILCCYRLNRLHRN
LKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIFISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYH
NGTFIINQNESPTVKAVFNYYIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
YEQAQRLRLQKQTKQTPSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASRFVCDFKGINAQTLEDKVLEV
CRDFYQNQRIYTKIKSAIDKRIKRQRNIEKHHTLTQEQLIEKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHIIQ
NIIQKRFTLNILYPYIETIHITKDKNLIGIYFKNEPLNIVNQTMQSSIA

Nucleotide

• Length: 1350 bp

>NTDB_id=502331 HWI54_RS00225 WP_000815640.1 51247..52596(-) (ccrA) [Staphylococcus epidermidis strain UMCG381]
ATGAAACAAGTCATAGGCTATTTACGTCAAAGTACGATGAAACAACAATCTCTTGCAGCACAGAAACAAGCTATCGAAGC
AATAGCCGAAAAACATCATATTCAACATATCAACTTTTATAGCGACAAACAATCAGGTCGCAAAGATAATCGTAGTGGGT
ATCGACAAATAACACAATTAATTCAACAAGGACAGTGTGACATATTATGCTGTTATCGTCTTAATAGGTTGCATCGTAAT
CTGAAAAATGCATTAAAACTCATCAAATTATGTCAAACGTACCATGTTCATATCTTAAGCGTACATGATGGTTACTTTGA
TATGGATCAAGCTTTCGACCGACTCAAGCTTAATATCTTCATCAGTTTAGCCGAACTTGAATCGGATAACATTGGAGAAC
AAGTCAGAAATGGGCTTCAAGAAAAAGCAAAGCAAGGTCGATTGATTACAACACATGCACCTTTTGGTTACGAATATCAC
AACGGAACATTCATCATCAATCAAAATGAGTCACCAACGGTAAAGGCTGTATTCAATTATTACATTAAAGGTCATGGTTA
TAAGAAAATTGCACAGTTATTAGAAGAAGATAACACGTATATCAATCGACAACCCTATCAAGTTCGTAACATTATCATCA
ATCCTAATTATTGTGGTCGTGTCAACAATCAATATGGCCAATTCGACAATATGTTTCCTTCTATTGTTTCCACAAGTATA
TATGAGCAAGCGCAGAGACTTCGATTGCAAAAACAAACCAAACAGACACCTTCGGATAATCAACTCAAACAAAAAATCAA
ATGCCCATGTTGTAATGCAACACTTACAAATATGACCATTAGAAAAAAGAATCATACATTACGTTACTACGTCTGTCCTA
AAAACATGAATGCTTCACGCTTTGTCTGTGATTTTAAAGGCATCAATGCACAAACACTTGAAGATAAAGTATTAGAAGTG
TGCCGAGACTTTTATCAAAATCAACGCATCTACACAAAAATTAAAAGTGCGATTGACAAACGCATCAAAAGACAAAGAAA
CATAGAAAAACATCACACATTGACTCAAGAACAACTGATAGAAAAGTTGGCACAAGGCATCATTGATGCAGAAACGTTCA
GAGAGCAAACACAATCATTACGTCAACAACCGCAACGCACTACATCTATCAATGGGCATCAAATACAACACATCATTCAA
AATATTATTCAAAAACGTTTCACGTTAAACATATTGTACCCCTATATTGAAACCATTCACATTACGAAAGATAAAAATCT
TATAGGAATCTATTTCAAAAATGAACCACTCAATATTGTCAATCAAACCATGCAATCATCGATTGCATAA

Domains

Predicted by InterProScan.

• Resolvase, N terminal domain (Resolvase) (4-147)

• Recombinase zinc beta ribbon domain (Zn_ribbon_recom) (262-321)

• Recombinase (Recombinase) (169-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccrA	Staphylococcus aureus N315	97.55	100	0.976
ccrA	Staphylococcus aureus COL	75.947	100	0.759