Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   KNZ81_RS22580 Genome accession   NZ_CP076385
Coordinates   5123783..5125699 (+) Length   638 a.a.
NCBI ID   WP_252922975.1    Uniprot ID   -
Organism   Streptomyces sp. G11C(2021)     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 5118783..5130699
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KNZ81_RS22545 (KNZ81_22395) - 5119093..5119389 (+) 297 WP_230536397.1 hypothetical protein -
  KNZ81_RS22565 (KNZ81_22415) - 5120074..5120373 (+) 300 WP_033948503.1 hypothetical protein -
  KNZ81_RS22570 (KNZ81_22420) - 5120464..5121918 (+) 1455 WP_215220838.1 FGGY-family carbohydrate kinase -
  KNZ81_RS22575 (KNZ81_22425) rcrP 5122050..5123783 (+) 1734 WP_033948504.1 ABC transporter ATP-binding protein Regulator
  KNZ81_RS22580 (KNZ81_22430) rcrQ 5123783..5125699 (+) 1917 WP_252922975.1 ABC transporter ATP-binding protein Regulator
  KNZ81_RS22585 (KNZ81_22435) - 5125789..5126004 (+) 216 WP_037787425.1 hypothetical protein -
  KNZ81_RS22590 (KNZ81_22440) rpoS 5126021..5127094 (-) 1074 WP_215221071.1 RNA polymerase sigma factor Regulator
  KNZ81_RS22595 (KNZ81_22445) dnaG 5127301..5129205 (-) 1905 WP_033948508.1 DNA primase -
  KNZ81_RS22600 (KNZ81_22450) - 5129326..5130588 (-) 1263 WP_128463660.1 NAD(P)/FAD-dependent oxidoreductase -

Sequence

Protein


Download         Length: 638 a.a.        Molecular weight: 68926.85 Da        Isoelectric Point: 4.7735

>NTDB_id=502329 KNZ81_RS22580 WP_252922975.1 5123783..5125699(+) (rcrQ) [Streptomyces sp. G11C(2021)]
MAGPMGAGAPEQQSMDFKGSGRRLLAQFRPEKNVLWAMLATGLVSVALSVTGPKILGWATDLVFAGIVGRDMPAGATREQ
VLAGMREGGDDGVADMLSGMDFTPGQGIDFGAVGEVLLLALGVFLLASALMAVSARLSNRAINRTVFRMRRDVQTKLSRL
PLSYFDQRQRGEVLSRATNDIDNIGQTLQQTMGQVVNSLLTVIGVLVMMFWISPLLALVALVTVPLSFVVATRVGKRSQP
HFVSQWSSTGTLNAHIEEMYTGHSLVKVFGRQEESAERFAEENDALYQASFKAQFTSGIMQPLMMFVSNFNYVLVAVVGG
LRVASGALSIGDVQAFIQYSRQFSMPLTQVASMANLVQSGVASAERVFELLDADEQEPDPVPGARLEKPRGRVALEQVSF
RYEPDRPLIEDLSLTVEPGRTVAIVGPTGAGKTTLVNLLMRFYEVTGGRITLDGVEIAAMAREDLRSRIGMVLQDTWLFG
GTIAENIAYGASREVSREEVEEAARAAHADRFVRTLPDGYDTVLDDEGSGVSAGEKQLVTIARAFLSDPVILVLDEATSS
VDTRTEVLIQQAMARLAHGRTSFVIAHRLSTIRDADTILVMENGAIVEQGSHTELLAAEGAYARLYAAQFAEAVAEVD

Nucleotide


Download         Length: 1917 bp        

>NTDB_id=502329 KNZ81_RS22580 WP_252922975.1 5123783..5125699(+) (rcrQ) [Streptomyces sp. G11C(2021)]
ATGGCGGGCCCGATGGGCGCCGGAGCGCCGGAACAGCAGTCGATGGACTTCAAGGGCTCGGGCAGGCGGCTGCTGGCCCA
GTTCCGCCCCGAGAAGAACGTGCTGTGGGCGATGCTCGCCACCGGCCTGGTCAGCGTGGCGCTCTCGGTGACCGGCCCGA
AGATCCTCGGCTGGGCCACCGACCTGGTCTTCGCGGGCATCGTCGGCCGCGACATGCCGGCCGGCGCCACCCGTGAGCAG
GTGCTGGCGGGGATGCGCGAGGGCGGCGACGACGGCGTGGCCGACATGCTCTCCGGGATGGACTTCACCCCCGGCCAGGG
CATCGACTTCGGCGCCGTCGGCGAGGTGCTGCTGCTCGCGCTCGGCGTCTTCCTGCTGGCCAGCGCCCTGATGGCGGTCT
CGGCCCGGCTCTCGAACCGCGCGATCAACCGCACCGTCTTCCGGATGCGCCGCGACGTGCAGACCAAGCTGTCGCGGCTG
CCGCTCTCCTACTTCGACCAGCGCCAGCGCGGCGAGGTGCTCAGCCGCGCCACCAACGACATCGACAACATCGGCCAGAC
GCTTCAGCAGACGATGGGCCAAGTGGTCAACTCGCTGCTGACCGTCATCGGTGTGCTGGTGATGATGTTCTGGATATCGC
CGCTGCTCGCCCTGGTGGCGCTGGTGACGGTGCCGCTCTCCTTCGTGGTCGCCACCCGGGTCGGCAAGCGTTCCCAGCCG
CACTTCGTCAGCCAGTGGTCCTCGACGGGCACGCTCAACGCCCACATCGAGGAGATGTACACCGGCCACAGCCTGGTCAA
GGTCTTCGGCCGCCAGGAGGAGTCGGCCGAGCGGTTCGCCGAGGAGAACGACGCGCTCTACCAGGCGTCTTTCAAGGCCC
AGTTCACCAGCGGCATCATGCAGCCGCTGATGATGTTCGTCTCCAACTTCAACTACGTGCTGGTCGCCGTCGTCGGTGGC
CTCCGGGTCGCCTCGGGCGCCCTGTCCATCGGTGACGTGCAGGCGTTCATCCAGTACTCCCGGCAGTTCTCGATGCCGCT
GACCCAGGTCGCCTCGATGGCCAACCTGGTGCAGTCCGGCGTCGCCTCCGCCGAGCGGGTCTTCGAACTCCTCGACGCCG
ACGAGCAGGAGCCCGACCCGGTCCCCGGCGCCCGCCTGGAGAAGCCGCGCGGCCGCGTCGCCCTGGAGCAGGTCTCCTTC
CGCTACGAGCCGGACCGGCCCCTGATCGAGGACCTCTCCCTGACCGTCGAGCCGGGCCGCACGGTCGCCATCGTCGGCCC
GACCGGCGCCGGCAAGACCACCCTGGTCAATCTGCTGATGCGGTTCTACGAGGTCACCGGCGGCCGGATCACCCTGGACG
GCGTCGAGATCGCCGCCATGGCCCGGGAGGACCTGCGTTCCCGGATCGGCATGGTCCTCCAGGACACCTGGCTGTTCGGC
GGCACCATCGCGGAGAACATCGCCTACGGCGCCTCCCGCGAGGTGAGCCGTGAGGAGGTCGAGGAGGCGGCCCGCGCCGC
CCACGCCGACCGCTTCGTCCGCACGCTCCCCGACGGCTACGACACCGTCCTCGACGACGAGGGCAGCGGTGTCAGCGCCG
GCGAGAAGCAGCTCGTCACCATCGCGCGGGCCTTCCTCTCCGACCCGGTGATCCTCGTCCTGGACGAGGCCACCAGCTCG
GTGGACACCCGTACCGAGGTGCTGATCCAGCAGGCCATGGCCCGCCTCGCGCACGGCCGGACCTCGTTCGTCATCGCCCA
CCGCCTCTCCACGATCCGGGACGCCGACACGATCCTGGTGATGGAGAACGGGGCCATCGTCGAGCAGGGCTCGCACACCG
AACTGCTCGCCGCCGAGGGGGCGTACGCCCGCCTGTACGCGGCCCAGTTCGCCGAGGCGGTCGCCGAGGTCGACTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(111-347)

ABC transporter (ABC_tran)

(410-559)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

45.073

85.893

0.387