Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   KNZ81_RS22575 Genome accession   NZ_CP076385
Coordinates   5122050..5123783 (+) Length   577 a.a.
NCBI ID   WP_033948504.1    Uniprot ID   -
Organism   Streptomyces sp. G11C(2021)     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 5117050..5128783
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KNZ81_RS22530 (KNZ81_22380) - 5117264..5118097 (-) 834 WP_215220836.1 helix-turn-helix transcriptional regulator -
  KNZ81_RS22535 (KNZ81_22385) - 5118108..5118842 (-) 735 WP_215220837.1 DUF6879 family protein -
  KNZ81_RS22545 (KNZ81_22395) - 5119093..5119389 (+) 297 WP_230536397.1 hypothetical protein -
  KNZ81_RS22565 (KNZ81_22415) - 5120074..5120373 (+) 300 WP_033948503.1 hypothetical protein -
  KNZ81_RS22570 (KNZ81_22420) - 5120464..5121918 (+) 1455 WP_215220838.1 FGGY-family carbohydrate kinase -
  KNZ81_RS22575 (KNZ81_22425) rcrP 5122050..5123783 (+) 1734 WP_033948504.1 ABC transporter ATP-binding protein Regulator
  KNZ81_RS22580 (KNZ81_22430) rcrQ 5123783..5125699 (+) 1917 WP_252922975.1 ABC transporter ATP-binding protein Regulator
  KNZ81_RS22585 (KNZ81_22435) - 5125789..5126004 (+) 216 WP_037787425.1 hypothetical protein -
  KNZ81_RS22590 (KNZ81_22440) rpoS 5126021..5127094 (-) 1074 WP_215221071.1 RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62560.82 Da        Isoelectric Point: 5.4438

>NTDB_id=502328 KNZ81_RS22575 WP_033948504.1 5122050..5123783(+) (rcrP) [Streptomyces sp. G11C(2021)]
MLIRLLRTYLRPYQKPIALVMVLQLLQTCAALYLPSLNADIIDRGVVRGDTGVILGLGAVMLAVTLVQMAGNIGAVYFGA
RTAAALGRDVRAAVFDRVQSFSARELNGFGAPSLITRTTNDVQQVQMLALMTFTLMVTAPIMCVGGVIMALGQDVPLSGV
LLAVLPVMAASVGVVVWRLRPLFRSMQKRLDTVNRVLREQITGNRVIRAFVRDRYETERFGRANTDLTEVSLGTGRLLAL
MFPLVMLVVNLSSLAVVWFGAHRIDSGAMEIGSLTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLETSSSVVP
PAGPVRELAGRGTLELRAAGFRYPGAEEWVLRDVELFAGPGETTAVIGSTGSGKTTLLGLAARLIDPVEGEVLVDGVDIR
RIDPALLARTVGLVPQKPYLFSGTVASNLRYGNPEASDEELWHALEVAQAKEFVERLEGGLEAPVSQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAALRAETAEAGVVIVAQRVSTIRDADRIVVLDEGRVVAVGRHQDLMERD
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=502328 KNZ81_RS22575 WP_033948504.1 5122050..5123783(+) (rcrP) [Streptomyces sp. G11C(2021)]
GTGCTCATACGACTCCTGCGGACGTATCTGCGTCCGTACCAGAAACCCATCGCGCTGGTGATGGTGCTCCAACTGCTCCA
GACCTGCGCGGCCCTGTACCTTCCGTCGCTCAACGCGGACATCATCGACCGGGGCGTCGTGCGGGGCGACACGGGCGTCA
TCCTCGGGCTCGGTGCCGTCATGCTGGCGGTCACGCTGGTGCAGATGGCGGGCAACATCGGCGCCGTCTACTTCGGCGCC
CGGACTGCCGCCGCCCTCGGCCGGGACGTGCGGGCGGCCGTCTTCGACCGGGTGCAGTCCTTCTCGGCGCGGGAGCTGAA
CGGGTTCGGGGCACCGTCCCTGATCACCCGGACCACCAACGACGTCCAGCAGGTCCAGATGCTGGCCCTGATGACCTTCA
CGCTGATGGTGACGGCCCCCATCATGTGCGTCGGCGGCGTGATCATGGCGCTGGGCCAGGACGTACCGCTCTCCGGGGTG
CTGCTGGCGGTGCTGCCCGTGATGGCGGCCTCGGTCGGCGTGGTCGTCTGGCGGCTGCGGCCGCTCTTCCGCTCCATGCA
AAAGCGGCTGGACACCGTCAACCGGGTGCTGCGGGAGCAGATCACCGGCAACCGCGTCATCCGCGCCTTCGTCCGCGACC
GGTACGAGACCGAGCGGTTCGGCCGCGCCAACACCGACCTGACCGAGGTCTCGCTGGGCACCGGCCGGCTGCTGGCGCTG
ATGTTCCCGCTGGTGATGCTGGTGGTGAACCTGTCCTCGCTGGCCGTGGTCTGGTTCGGTGCCCACCGGATCGACAGCGG
CGCGATGGAGATCGGCTCGCTGACCGCCTTTCTCGCCTACCTGATGCAGATCGTCATGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCCGAGGTGTGCGCCGAGCGCATCCAGGAGGTTCTGGAGACGAGCAGCAGCGTCGTCCCG
CCCGCCGGGCCCGTCCGCGAACTGGCCGGCCGGGGCACGCTGGAGCTGCGGGCCGCGGGCTTCCGCTACCCGGGCGCCGA
GGAGTGGGTCCTGCGCGACGTGGAGCTCTTCGCGGGGCCCGGCGAGACCACCGCCGTCATCGGCTCGACCGGCTCCGGCA
AGACCACGCTGCTCGGCCTCGCCGCCCGGCTGATCGACCCCGTCGAGGGCGAGGTGCTGGTCGACGGCGTCGACATCCGC
CGGATCGACCCGGCCCTGCTGGCCCGCACCGTCGGCCTCGTCCCGCAGAAGCCGTACCTCTTCTCCGGCACCGTGGCGAG
CAACCTGCGGTACGGCAACCCGGAGGCGAGCGACGAGGAGCTGTGGCACGCGCTGGAGGTGGCGCAGGCCAAGGAGTTCG
TCGAGCGGCTGGAGGGCGGGCTGGAGGCCCCCGTCTCGCAGGGCGGGACCAACGTCTCGGGCGGTCAGCGGCAGCGGCTC
GCCATCGCCCGCACTCTGGTGCAGCGCCCCGAGATCTACCTCTTCGACGACTCCTTCTCGGCGCTGGACTACGCGACCGA
CGCGGCGCTGCGGGCGGCCCTGCGCGCGGAGACAGCCGAGGCGGGCGTGGTGATCGTCGCCCAGCGGGTGTCGACCATCC
GTGACGCCGACCGGATCGTCGTCCTCGACGAGGGCCGGGTGGTGGCGGTCGGCCGCCACCAGGACCTGATGGAACGGGAC
GAGACCTACCGGGAGATCGTGCTCTCCCAGCTGACGGAAGCGGAGGCCGCGTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(18-288)

ABC transporter (ABC_tran)

(351-498)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

38.287

99.133

0.38