Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   KNZ81_RS09340 Genome accession   NZ_CP076385
Coordinates   2221716..2222696 (-) Length   326 a.a.
NCBI ID   WP_023417252.1    Uniprot ID   -
Organism   Streptomyces sp. G11C(2021)     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 2216716..2227696
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KNZ81_RS09325 (KNZ81_09315) - 2218087..2219085 (-) 999 WP_023417249.1 hypothetical protein -
  KNZ81_RS09330 (KNZ81_09320) - 2219156..2220148 (-) 993 WP_215222305.1 hypothetical protein -
  KNZ81_RS09335 (KNZ81_09325) - 2220518..2221729 (-) 1212 WP_251682060.1 ABC transporter ATP-binding protein -
  KNZ81_RS09340 (KNZ81_09330) amiE 2221716..2222696 (-) 981 WP_023417252.1 ABC transporter ATP-binding protein Regulator
  KNZ81_RS09345 (KNZ81_09335) - 2222710..2223696 (-) 987 WP_023417253.1 ABC transporter permease -
  KNZ81_RS09350 (KNZ81_09340) - 2223689..2224612 (-) 924 WP_023417254.1 ABC transporter permease -
  KNZ81_RS09355 (KNZ81_09345) - 2224704..2226335 (-) 1632 WP_033954242.1 ABC transporter substrate-binding protein -
  KNZ81_RS09360 (KNZ81_09350) - 2226539..2227687 (-) 1149 WP_023417256.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 326 a.a.        Molecular weight: 35908.50 Da        Isoelectric Point: 6.4141

>NTDB_id=502301 KNZ81_RS09340 WP_023417252.1 2221716..2222696(-) (amiE) [Streptomyces sp. G11C(2021)]
MLLDVRDLQVEFHTREGVAKAVNGVSYSVDAGETLAVLGESGSGKSVTAQAIMGILDTPPGHITGGQVIFEGRDLLTLRE
DRRRKVRGAEMAMIFQDALSSLNPVLTVGEQLGEMFTVHRGMSRKDARARAVELMDRVRIPAATERVDQYPHQFSGGMRQ
RIMIAMAMALEPKLIIADEPTTALDVTVQAQVMELLAELQREYNMGLILITHDLGVVADVADKIAVMYAGRIVETAPVHD
IYRAPAHPYTRGLLDSIPRLDQKGRELYAIKGLPPNLLAIPPGCAFHPRCPLAQPVCTTDEPPLYEVDPRRRSACHFWKE
TLDGAR

Nucleotide


Download         Length: 981 bp        

>NTDB_id=502301 KNZ81_RS09340 WP_023417252.1 2221716..2222696(-) (amiE) [Streptomyces sp. G11C(2021)]
ATGTTGCTCGACGTGCGCGACCTCCAGGTGGAGTTCCACACCAGGGAAGGCGTCGCCAAGGCCGTCAACGGCGTCTCCTA
CTCCGTCGACGCGGGGGAGACCCTGGCGGTGCTCGGCGAATCCGGCTCCGGCAAGTCCGTCACCGCCCAGGCCATCATGG
GCATCCTCGACACCCCGCCCGGGCACATCACGGGCGGTCAGGTCATCTTCGAGGGGCGCGACCTGCTGACCCTCAGGGAG
GACAGGCGGCGCAAGGTGCGCGGCGCCGAGATGGCGATGATCTTCCAGGACGCGCTCTCCTCGCTCAACCCGGTGCTCAC
CGTCGGCGAGCAGCTCGGTGAGATGTTCACCGTCCACCGCGGGATGTCCCGCAAGGACGCCAGGGCGCGGGCGGTCGAGC
TGATGGACCGGGTCCGCATCCCGGCCGCCACCGAACGCGTCGACCAGTACCCGCACCAGTTCTCCGGCGGGATGCGCCAG
CGCATCATGATCGCCATGGCGATGGCGCTGGAGCCCAAGCTGATCATCGCCGACGAGCCCACCACCGCCCTCGACGTCAC
CGTCCAGGCCCAGGTCATGGAGTTGCTCGCCGAGCTGCAGCGCGAGTACAACATGGGGCTCATCCTCATCACCCACGACC
TCGGCGTCGTCGCCGACGTCGCCGACAAGATCGCGGTGATGTACGCGGGCCGGATCGTCGAGACCGCCCCCGTCCACGAC
ATCTACCGGGCTCCCGCCCACCCGTACACCCGCGGCCTGCTCGACTCCATCCCGCGCCTGGACCAGAAGGGCCGGGAGCT
GTACGCGATCAAGGGGCTGCCGCCCAACCTGCTGGCCATCCCGCCCGGCTGCGCCTTCCACCCGCGCTGCCCGCTGGCCC
AGCCGGTCTGCACCACCGACGAGCCGCCGCTCTACGAGGTCGACCCGCGCCGCCGGAGCGCCTGCCACTTCTGGAAGGAG
ACGCTCGATGGAGCCCGATGA

Domains

Predicted by InterProScan.

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(233-297)

ABC transporter (ABC_tran)

(23-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

45.82

99.08

0.454
  amiE Streptococcus thermophilus LMG 18311

45.201

99.08

0.448
  amiE Streptococcus thermophilus LMD-9

45.201

99.08

0.448
  oppD Streptococcus mutans UA159

45.541

96.319

0.439