Detailed information NTG0502172

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KNN08_RS18620
• Genome accession: NZ_CP076318
• Coordinates: 3520421..3521446 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain Survcare045
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3515421..3526446

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KNN08_RS18590 (KNN08_18585)	zapB	3515505..3515750 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
KNN08_RS18595 (KNN08_18590)	rraA	3515835..3516320 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KNN08_RS18600 (KNN08_18595)	menA	3516413..3517339 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KNN08_RS18605 (KNN08_18600)	hslU	3517406..3518737 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
KNN08_RS18610 (KNN08_18605)	hslV	3518747..3519277 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KNN08_RS18615 (KNN08_18610)	ftsN	3519370..3520329 (-)	960	WP_000068828.1	cell division protein FtsN	-
KNN08_RS18620 (KNN08_18615)	cytR	3520421..3521446 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KNN08_RS18625 (KNN08_18620)	priA	3521602..3523800 (-)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
KNN08_RS18630 (KNN08_18625)	rpmE	3524003..3524215 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
KNN08_RS18635 (KNN08_18630)	yiiX	3524276..3524884 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
KNN08_RS18640 (KNN08_18635)	metJ	3525068..3525385 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=502172 KNN08_RS18620 WP_000644904.1 3520421..3521446(-) (cytR) [Escherichia coli strain Survcare045]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=502172 KNN08_RS18620 WP_000644904.1 3520421..3521446(-) (cytR) [Escherichia coli strain Survcare045]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628