Detailed information NTG0502158

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KNN08_RS16350
• Genome accession: NZ_CP076318
• Coordinates: 3056909..3057892 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain Survcare045
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3051909..3062892

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KNN08_RS16325 (KNN08_16320)	bcsF	3052070..3052261 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
KNN08_RS16330 (KNN08_16325)	bcsG	3052258..3053937 (+)	1680	WP_000191619.1	cellulose biosynthesis protein BcsG	-
KNN08_RS16335 (KNN08_16330)	ldrD	3054024..3054131 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
KNN08_RS16340 (KNN08_16335)	yhjV	3054607..3055878 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
KNN08_RS16345 (KNN08_16340)	amiE	3055908..3056912 (-)	1005	WP_039023208.1	dipeptide ABC transporter ATP-binding subunit DppF	Regulator
KNN08_RS16350 (KNN08_16345)	amiE	3056909..3057892 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
KNN08_RS16355 (KNN08_16350)	dppC	3057903..3058805 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KNN08_RS16360 (KNN08_16355)	dppB	3058815..3059834 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
KNN08_RS25470	-	3059998..3060108 (+)	111	Protein_2901	hypothetical protein	-
KNN08_RS16365 (KNN08_16360)	dppA	3060142..3061749 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=502158 KNN08_RS16350 WP_001196486.1 3056909..3057892(-) (amiE) [Escherichia coli strain Survcare045]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=502158 KNN08_RS16350 WP_001196486.1 3056909..3057892(-) (amiE) [Escherichia coli strain Survcare045]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404