Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ITG70_RS02075 Genome accession   NZ_CP064392
Coordinates   444566..444976 (+) Length   136 a.a.
NCBI ID   WP_222829484.1    Uniprot ID   -
Organism   Pseudomonas aeruginosa strain SRRSH15     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 439566..449976
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ITG70_RS02045 (ITG70_02045) - 439614..440618 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  ITG70_RS02050 (ITG70_02050) pyrR 440642..441154 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ITG70_RS02055 (ITG70_02055) ruvX 441266..441700 (-) 435 WP_003121753.1 Holliday junction resolvase RuvX -
  ITG70_RS02060 (ITG70_02060) - 441700..442269 (-) 570 WP_010793542.1 YqgE/AlgH family protein -
  ITG70_RS02065 (ITG70_02065) - 442318..443211 (-) 894 WP_003162015.1 energy transducer TonB -
  ITG70_RS02070 (ITG70_02070) gshB 443358..444311 (-) 954 WP_003100943.1 glutathione synthase -
  ITG70_RS02075 (ITG70_02075) pilG 444566..444976 (+) 411 WP_222829484.1 PleD family two-component system response regulator Regulator
  ITG70_RS02080 (ITG70_02080) pilH 445023..445388 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  ITG70_RS02085 (ITG70_02085) - 445439..445975 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  ITG70_RS02090 (ITG70_02090) pilJ 446060..448108 (+) 2049 WP_087850254.1 chemotaxis chemoreceptor PilJ -
  ITG70_RS02095 (ITG70_02095) pilK 448169..449044 (+) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14846.29 Da        Isoelectric Point: 7.8525

>NTDB_id=501640 ITG70_RS02075 WP_222829484.1 444566..444976(+) (pilG) [Pseudomonas aeruginosa strain SRRSH15]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAF
KSTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=501640 ITG70_RS02075 WP_222829484.1 444566..444976(+) (pilG) [Pseudomonas aeruginosa strain SRRSH15]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGAAGATCGCCGATACCCATCCGA
ACATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTC
AAGTCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCA
GTACCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACG
CCGTTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.219

94.118

0.699
  vicR Streptococcus mutans UA159

44.068

86.765

0.382