Detailed information NTG0501446

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: IUJ52_RS09680
• Genome accession: NZ_CP064379
• Coordinates: 2070894..2071898 (+)
• Length: 334 a.a.
• NCBI ID: WP_004728564.1
• Uniprot ID: -
• Organism: Vibrio furnissii strain PartQ-Vfurnissii-RM8376
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2065894..2076898

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IUJ52_RS09660 (IUJ52_09655)	-	2066022..2066285 (-)	264	WP_004728560.1	DUF3624 domain-containing protein	-
IUJ52_RS09665 (IUJ52_09660)	-	2066409..2067143 (-)	735	WP_004728561.1	glutathione peroxidase	-
IUJ52_RS09670 (IUJ52_09665)	oxyR	2067287..2068183 (+)	897	WP_004728562.1	DNA-binding transcriptional regulator OxyR	-
IUJ52_RS09675 (IUJ52_09670)	-	2068269..2070749 (-)	2481	WP_038152617.1	PBP1A family penicillin-binding protein	-
IUJ52_RS09680 (IUJ52_09675)	pilM	2070894..2071898 (+)	1005	WP_004728564.1	type IV pilus assembly protein PilM	Machinery gene
IUJ52_RS09685 (IUJ52_09680)	pilN	2071888..2072478 (+)	591	WP_004728565.1	PilN domain-containing protein	Machinery gene
IUJ52_RS09690 (IUJ52_09685)	pilO	2072471..2073061 (+)	591	WP_004728566.1	type 4a pilus biogenesis protein PilO	Machinery gene
IUJ52_RS09695 (IUJ52_09690)	pilP	2073051..2073563 (+)	513	WP_004728567.1	pilus assembly protein PilP	Machinery gene
IUJ52_RS09700 (IUJ52_09695)	pilQ	2073588..2075312 (+)	1725	WP_004728568.1	type IV pilus secretin PilQ family protein	Machinery gene
IUJ52_RS09705 (IUJ52_09700)	aroK	2075500..2076018 (+)	519	WP_004728569.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36877.16 Da
• Isoelectric Point: 6.6617

>NTDB_id=501446 IUJ52_RS09680 WP_004728564.1 2070894..2071898(+) (pilM) [Vibrio furnissii strain PartQ-Vfurnissii-RM8376]
MGKSLVTGVDIGHHSIKAVVLKPKGESYSLVGYQEIVVSDDIFADNHTLDYQKIVKKLKELKKGLPLFSRKVALAVPDNA
VISKVLQIDSDLDASEQEFAVYQAFSHQSPFPIDDLSLDFVPSGDNPAGRSTNTLYQVYATRREVVDNRLSVASKAGFEP
LLLDVQVHGLLQIWQWVSRAQQRDDWMLVDVGLTQTTLCMDFADKAPFYKDIPLGTRQWHADPTPHPVPLSEPPMAGVNE
LVERIARQVQLLLSLQGHQALGGIWLSGGGATTEGLSAALAARLNLPCELFHPLTGFVTRRRMRARVPDDLQRFSTAAGL
ALRGLNWLERDHGA

Nucleotide

• Length: 1005 bp

>NTDB_id=501446 IUJ52_RS09680 WP_004728564.1 2070894..2071898(+) (pilM) [Vibrio furnissii strain PartQ-Vfurnissii-RM8376]
ATGGGTAAATCATTAGTTACAGGTGTCGATATCGGCCACCACAGTATTAAAGCGGTGGTTTTAAAACCGAAGGGCGAATC
GTATTCGCTGGTCGGCTACCAAGAAATAGTCGTATCCGACGATATTTTCGCTGATAACCACACGCTGGATTATCAGAAAA
TTGTAAAGAAACTCAAAGAACTAAAAAAGGGATTACCGTTATTTAGTCGCAAAGTTGCGCTGGCTGTGCCGGATAATGCG
GTAATAAGTAAGGTATTACAGATAGATAGCGATTTGGATGCCAGCGAACAAGAATTTGCTGTCTATCAGGCGTTTTCCCA
TCAATCGCCGTTTCCCATCGATGATCTGAGTTTGGATTTCGTACCAAGCGGCGATAACCCCGCCGGGCGCAGCACCAATA
CCCTGTATCAAGTGTACGCCACGCGACGCGAAGTGGTCGATAACCGGTTATCGGTGGCGAGCAAAGCGGGCTTTGAGCCG
CTGCTGCTCGATGTGCAGGTGCATGGGTTGCTCCAGATTTGGCAATGGGTGAGTCGCGCGCAGCAGCGCGACGATTGGAT
GCTGGTGGACGTCGGGTTGACGCAAACCACGTTATGCATGGATTTCGCCGATAAAGCGCCCTTCTATAAAGACATTCCGC
TGGGAACGCGTCAATGGCATGCCGACCCCACGCCCCATCCTGTGCCGCTGAGCGAGCCTCCGATGGCTGGAGTCAACGAG
CTGGTTGAGCGAATTGCGCGCCAAGTGCAACTGCTGTTGTCCTTGCAGGGCCATCAAGCGCTGGGCGGAATTTGGCTGTC
GGGTGGTGGGGCGACAACGGAAGGCCTCAGCGCGGCTTTGGCTGCGCGACTGAATCTGCCGTGTGAACTGTTTCATCCGC
TGACGGGATTTGTGACGCGCCGCCGCATGCGAGCGCGTGTACCAGACGATCTGCAACGTTTTAGTACGGCGGCTGGCTTG
GCGCTGCGCGGACTCAACTGGTTGGAGCGTGATCATGGTGCATGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (239-324)

• Type IV pilus assembly protein PilM; (PilM_2) (8-218)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Vibrio cholerae strain A1552	64.307	100	0.653
pilM	Vibrio campbellii strain DS40M4	45.266	100	0.458