Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   IQ680_RS13645 Genome accession   NZ_CP064266
Coordinates   2654390..2655067 (+) Length   225 a.a.
NCBI ID   WP_098337443.1    Uniprot ID   -
Organism   Bacillus pseudomycoides strain N451-2     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2649390..2660067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IQ680_RS13625 - 2650049..2651698 (+) 1650 WP_243521125.1 peptide ABC transporter substrate-binding protein -
  IQ680_RS13630 - 2651733..2651936 (-) 204 WP_000225326.1 hypothetical protein -
  IQ680_RS13635 spx 2652523..2652918 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  IQ680_RS13640 - 2653200..2653871 (-) 672 WP_098337444.1 TerC family protein -
  IQ680_RS13645 mecA 2654390..2655067 (+) 678 WP_098337443.1 adaptor protein MecA Regulator
  IQ680_RS13650 cls 2655152..2656696 (+) 1545 WP_243521126.1 cardiolipin synthase -
  IQ680_RS13655 - 2656791..2658032 (+) 1242 WP_243521127.1 competence protein CoiA -
  IQ680_RS13660 pepF 2658081..2659907 (+) 1827 WP_243521128.1 oligoendopeptidase F Regulator

Sequence

Protein


Download         Length: 225 a.a.        Molecular weight: 26860.98 Da        Isoelectric Point: 4.0548

>NTDB_id=500417 IQ680_RS13645 WP_098337443.1 2654390..2655067(+) (mecA) [Bacillus pseudomycoides strain N451-2]
MDIERINDHTMKFFITYVDIEDRGFNREEIWYNRERSEQLFWEMMDEARDHDDFFIDGPLWIQVQAMDKGIEVLVTKAEL
SKDGQKLELPIGLDKIIDIPLDERIESLFQQELEEEIEAGTNFNEDGTFGFLIKFDDFEDVISLSHRLIFEDIKDELYSF
EDRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTVHRVSEYGKQVVKEHALETIRSHFPPKA

Nucleotide


Download         Length: 678 bp        

>NTDB_id=500417 IQ680_RS13645 WP_098337443.1 2654390..2655067(+) (mecA) [Bacillus pseudomycoides strain N451-2]
TTGGACATTGAAAGAATTAACGATCATACGATGAAATTTTTTATTACGTACGTTGATATAGAAGATAGAGGGTTTAATCG
AGAAGAGATTTGGTACAATCGTGAACGAAGCGAACAATTATTTTGGGAAATGATGGATGAAGCTCGTGATCATGATGATT
TCTTTATTGATGGGCCACTATGGATCCAAGTACAGGCGATGGATAAAGGCATCGAAGTACTTGTAACGAAAGCAGAGCTT
TCAAAAGATGGACAAAAATTAGAATTACCAATAGGTCTAGATAAGATCATTGATATTCCGCTAGATGAGCGGATTGAATC
ACTATTTCAACAAGAGCTAGAGGAAGAGATAGAAGCGGGAACAAACTTTAACGAAGATGGAACATTTGGCTTTTTAATTA
AATTTGACGATTTTGAAGACGTTATTTCGTTAAGTCATCGTCTTATATTTGAAGATATAAAAGATGAACTATATTCGTTT
GAAGACCGCTATTATGTATATGTTGAATTTGATGAAGTGCTACACGATGAAGAAGAAATTGACCGTATTTTAAGTATTAT
TTTAGAATATGGAGAAGAGTCTACTTTAACGGTTCACCGTGTAAGTGAGTACGGTAAACAGGTTGTTAAAGAACACGCAC
TTGAGACGATTCGCAGTCATTTTCCTCCTAAAGCGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.157

99.111

0.547