Detailed information    

insolico Bioinformatically predicted

Overview

Name   recR   Type   Machinery gene
Locus tag   KE3_RS02985 Genome accession   NC_021900
Coordinates   551024..551620 (+) Length   198 a.a.
NCBI ID   WP_014334442.1    Uniprot ID   A0AB33AKP9
Organism   Streptococcus lutetiensis 033     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 546024..556620
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KE3_RS02965 (KE3_0602) - 546615..547307 (+) 693 WP_020916409.1 phosphoglycerate mutase -
  KE3_RS02970 (KE3_0603) - 547483..548004 (+) 522 WP_020916410.1 transcription repressor NadR -
  KE3_RS02975 (KE3_0604) - 548181..548729 (+) 549 WP_020916411.1 hypothetical protein -
  KE3_RS02980 (KE3_0605) pbp2b 548883..550964 (+) 2082 WP_020916412.1 penicillin-binding protein PBP2B -
  KE3_RS02985 (KE3_0606) recR 551024..551620 (+) 597 WP_014334442.1 recombination mediator RecR Machinery gene
  KE3_RS02990 (KE3_0607) - 551804..553084 (+) 1281 Protein_538 DUF6056 family protein -
  KE3_RS02995 (KE3_0608) - 553352..554398 (+) 1047 WP_020916414.1 D-alanine--D-alanine ligase -
  KE3_RS03000 (KE3_0609) - 554440..555426 (-) 987 WP_020915979.1 IS30 family transposase -
  KE3_RS03005 (KE3_0610) - 555564..556121 (-) 558 WP_043894995.1 folate family ECF transporter S component -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 21725.90 Da        Isoelectric Point: 4.5918

>NTDB_id=50026 KE3_RS02985 WP_014334442.1 551024..551620(+) (recR) [Streptococcus lutetiensis 033]
MLYPTPIAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDEDPCQICNDQTRDRS
VILVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDDINLKSLITRLMDSEVSEVIIATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL

Nucleotide


Download         Length: 597 bp        

>NTDB_id=50026 KE3_RS02985 WP_014334442.1 551024..551620(+) (recR) [Streptococcus lutetiensis 033]
ATGCTTTATCCAACACCAATTGCAAAGCTAATTGATAGTTTTACAAAGTTACCCGGAATCGGGATTAAAACGGCGACTCG
TTTGGCCTTTTACACGATTGGCATGTCTGACGAAGACGTGAATGAATTTGCTAAAAACTTGTTAGCTGCAAAACGTGAAT
TAACTTATTGTTCAGTGTGCGGGAATTTGACTGATGAAGATCCTTGCCAAATTTGTAATGATCAGACACGTGATCGTTCA
GTGATTTTGGTGGTTGAGGATTCAAAAGATGTCTCTGCCATGGAAAAAATCCAAGAATATCACGGACTTTATCATGTCTT
ACACGGACTTATTTCACCGATGAATGGTGTCGGTCCTGATGATATTAATTTGAAGTCATTGATTACACGTTTGATGGATA
GTGAGGTTAGTGAGGTTATTATTGCAACCAACGCCACCGCAGATGGTGAAGCAACATCTATGTATATCTCACGTGTCCTA
AAACCTGCAGGAATCAAAGTAACACGCTTGGCGCGTGGATTAGCGGTAGGTTCAGATATCGAATATGCCGATGAAGTGAC
CCTACTTCGCGCCATTGAAAATCGGACAGAATTGTAA

Domains

Predicted by InterProScan.

RecR protein (RecR_ZnF)

(39-78)

Toprim domain (Toprim_4)

(80-171)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AB33AKP9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recR Streptococcus pneumoniae R6

87.374

100

0.874
  recR Bacillus subtilis subsp. subtilis str. 168

65.152

100

0.652
  recR Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

48.205

98.485

0.475

Multiple sequence alignment