Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   KE3_RS02030 Genome accession   NC_021900
Coordinates   366831..367865 (+) Length   344 a.a.
NCBI ID   WP_020916251.1    Uniprot ID   A0AB33AK97
Organism   Streptococcus lutetiensis 033     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 361831..372865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KE3_RS02000 (KE3_0409) tsaE 363114..363557 (+) 444 WP_020916245.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  KE3_RS02005 (KE3_0410) - 363550..364062 (+) 513 WP_020916246.1 GNAT family N-acetyltransferase -
  KE3_RS02010 (KE3_0411) brpA 364073..365233 (+) 1161 WP_020916247.1 biofilm formation/cell division transcriptional regulator BrpA -
  KE3_RS02015 (KE3_0412) - 365318..365623 (-) 306 WP_020916248.1 hypothetical protein -
  KE3_RS02020 (KE3_0413) - 365620..366039 (-) 420 WP_020916249.1 HIT family protein -
  KE3_RS02025 (KE3_0414) pptA 366103..366828 (+) 726 WP_020916250.1 ABC transporter ATP-binding protein Regulator
  KE3_RS02030 (KE3_0415) pptB 366831..367865 (+) 1035 WP_020916251.1 ABC transporter permease Regulator
  KE3_RS02035 (KE3_0416) ccrZ 367918..368739 (+) 822 WP_043894957.1 cell cycle regulator CcrZ -
  KE3_RS02040 (KE3_0417) trmB 368739..369377 (+) 639 WP_020916253.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  KE3_RS02050 (KE3_0418) - 369742..370773 (+) 1032 WP_043894958.1 sensor domain-containing diguanylate cyclase -
  KE3_RS02055 (KE3_0419) - 370770..371837 (+) 1068 WP_043894959.1 bifunctional glycosyltransferase family 2/GtrA family protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 39935.40 Da        Isoelectric Point: 10.3924

>NTDB_id=50012 KE3_RS02030 WP_020916251.1 366831..367865(+) (pptB) [Streptococcus lutetiensis 033]
MKEVFRKRRSLFLGQCLKYLRYVLNDHFVLVLLFLSGFLMVQYGELLKHFPKRHWWLEAILIIVTVTLLSLGKIATYIEA
PDKLFYLPKEEEVVAWIHQARVRSFGVWAVLQTAVFLLLAPIFFKLGFSIPVFSVLLLILLGIKWVIMARKEKVFFRDGH
FSWEAAITYETKRRQSILKFFALFTTVKGISASVKRRAYLDKLLALVKKGHDKTWSNLYLRAFLRSSDYLALTLRLVLLS
VLALLFIPNHLVAVGLALILNYLLLFQLLGLAQHFEYQYLTRLYPISEIQKLANLKALLKTLSYVICLIELLLCFSLKAA
GLLILITVIVTEWYLPYKIAKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=50012 KE3_RS02030 WP_020916251.1 366831..367865(+) (pptB) [Streptococcus lutetiensis 033]
ATGAAAGAAGTTTTTCGAAAACGACGCAGCCTCTTTTTAGGGCAATGTCTGAAATACTTACGTTATGTATTGAACGATCA
CTTTGTCTTGGTCTTGCTTTTCTTATCAGGTTTTTTGATGGTTCAATACGGAGAACTATTGAAGCATTTTCCAAAGCGGC
ATTGGTGGCTTGAGGCTATTCTAATTATTGTGACAGTTACCCTGCTTAGTCTTGGAAAAATTGCGACTTATATTGAGGCA
CCAGATAAGCTATTTTATTTGCCAAAGGAAGAAGAAGTGGTGGCTTGGATTCATCAAGCGAGAGTACGTTCTTTTGGTGT
TTGGGCAGTTTTGCAAACGGCTGTTTTCTTGTTGTTAGCACCCATTTTCTTTAAATTAGGTTTCTCAATTCCTGTATTTT
CGGTACTTTTGCTAATTTTGCTTGGTATCAAGTGGGTGATTATGGCAAGAAAAGAAAAAGTCTTTTTTAGAGATGGTCAT
TTTTCTTGGGAAGCTGCCATTACTTATGAAACTAAGCGTCGTCAATCTATTTTGAAATTCTTTGCCCTCTTTACAACGGT
TAAAGGAATTTCAGCAAGCGTCAAACGTCGTGCTTACTTAGATAAGCTTCTTGCTTTGGTTAAGAAAGGTCATGATAAAA
CATGGTCAAACCTTTATCTTAGGGCTTTTCTTCGCAGTTCAGATTATCTAGCTTTGACCTTGCGTTTAGTTTTGTTAAGT
GTTCTTGCTTTGCTATTTATTCCAAATCATCTGGTAGCAGTTGGACTTGCTTTGATTTTGAATTATCTTTTACTGTTTCA
GTTGTTAGGACTTGCCCAACATTTTGAGTATCAATATTTAACACGCTTATACCCTATTTCAGAAATACAGAAACTGGCTA
ATTTAAAGGCTTTGTTGAAGACTTTGTCTTATGTTATTTGCTTGATTGAGCTTCTGCTATGTTTTTCTTTGAAGGCTGCG
GGGCTTCTGATTTTGATTACTGTAATTGTTACAGAATGGTATCTTCCTTACAAAATTGCGAAGATGATTGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AB33AK97

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

46.821

100

0.471

  pptB Streptococcus salivarius strain HSISS4

45.954

100

0.462


Multiple sequence alignment