Detailed information NTG0500030

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KKZ11_RS22015
• Genome accession: NZ_CP075731
• Coordinates: 4568187..4569212 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain CP52E
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4563187..4574212

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KKZ11_RS21995 (KKZ11_21905)	metJ	4564372..4564689 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
KKZ11_RS22000 (KKZ11_21910)	yiiX	4564749..4565357 (+)	609	WP_089601870.1	YiiX family permuted papain-like enzyme	-
KKZ11_RS22005 (KKZ11_21915)	rpmE	4565418..4565630 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
KKZ11_RS22010 (KKZ11_21920)	priA	4565833..4568031 (+)	2199	WP_136698613.1	primosomal protein N'	Machinery gene
KKZ11_RS22015 (KKZ11_21925)	cytR	4568187..4569212 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
KKZ11_RS22020 (KKZ11_21930)	ftsN	4569304..4570263 (+)	960	WP_000068834.1	cell division protein FtsN	-
KKZ11_RS22025 (KKZ11_21935)	hslV	4570356..4570886 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KKZ11_RS22030 (KKZ11_21940)	hslU	4570896..4572227 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
KKZ11_RS22035 (KKZ11_21945)	menA	4572294..4573220 (+)	927	WP_040063905.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KKZ11_RS22040 (KKZ11_21950)	rraA	4573313..4573798 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=500030 KKZ11_RS22015 WP_000644908.1 4568187..4569212(+) (cytR) [Escherichia coli strain CP52E]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=500030 KKZ11_RS22015 WP_000644908.1 4568187..4569212(+) (cytR) [Escherichia coli strain CP52E]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTAACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAGCAGCTACTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATTGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCACGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625