Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   IRJ28_RS12870 Genome accession   NZ_CP064096
Coordinates   2431549..2431740 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain N1142-3at     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2426549..2436740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ28_RS12845 appD 2426874..2427860 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  IRJ28_RS12850 yjaZ 2428052..2428837 (-) 786 WP_003232967.1 DUF2268 domain-containing protein -
  IRJ28_RS12855 fabF 2428913..2430154 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  IRJ28_RS12860 fabH 2430177..2431115 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  IRJ28_RS12865 yjzB 2431280..2431519 (+) 240 WP_003232972.1 spore coat protein YjzB -
  IRJ28_RS12870 comZ 2431549..2431740 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  IRJ28_RS12875 med 2431755..2432708 (-) 954 WP_003245494.1 transcriptional regulator Med Regulator
  IRJ28_RS12880 - 2432799..2433356 (-) 558 WP_003232974.1 hypothetical protein -
  IRJ28_RS12885 - 2433438..2434172 (-) 735 WP_003245223.1 hypothetical protein -
  IRJ28_RS12890 yjzD 2434421..2434606 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  IRJ28_RS12895 yjzC 2434652..2434831 (-) 180 WP_003245356.1 YjzC family protein -
  IRJ28_RS12900 argF 2434917..2435876 (-) 960 WP_003232980.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=499483 IRJ28_RS12870 WP_003224559.1 2431549..2431740(-) (comZ) [Bacillus subtilis strain N1142-3at]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=499483 IRJ28_RS12870 WP_003224559.1 2431549..2431740(-) (comZ) [Bacillus subtilis strain N1142-3at]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1