Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   IRJ27_RS03705 Genome accession   NZ_CP064095
Coordinates   751809..752762 (-) Length   317 a.a.
NCBI ID   WP_003245494.1    Uniprot ID   A0AAE2SG99
Organism   Bacillus subtilis strain N1303-2Ay     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 746809..757762
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ27_RS03675 appD 746928..747914 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  IRJ27_RS03680 yjaZ 748106..748891 (-) 786 WP_003232967.1 DUF2268 domain-containing protein -
  IRJ27_RS03685 fabF 748967..750208 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  IRJ27_RS03690 fabH 750231..751169 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  IRJ27_RS03695 yjzB 751334..751573 (+) 240 WP_003232972.1 spore coat protein YjzB -
  IRJ27_RS03700 comZ 751603..751794 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  IRJ27_RS03705 med 751809..752762 (-) 954 WP_003245494.1 transcriptional regulator Med Regulator
  IRJ27_RS03710 - 752853..753410 (-) 558 WP_003232974.1 hypothetical protein -
  IRJ27_RS03715 - 753492..754226 (-) 735 WP_003245223.1 hypothetical protein -
  IRJ27_RS03720 yjzD 754475..754660 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  IRJ27_RS03725 yjzC 754706..754885 (-) 180 WP_003245356.1 YjzC family protein -
  IRJ27_RS03730 argF 754971..755930 (-) 960 WP_003232980.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35310.80 Da        Isoelectric Point: 4.5457

>NTDB_id=499368 IRJ27_RS03705 WP_003245494.1 751809..752762(-) (med) [Bacillus subtilis strain N1303-2Ay]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=499368 IRJ27_RS03705 WP_003245494.1 751809..752762(-) (med) [Bacillus subtilis strain N1303-2Ay]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

100

100

1