Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   IRJ27_RS03700 Genome accession   NZ_CP064095
Coordinates   751603..751794 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain N1303-2Ay     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 746603..756794
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ27_RS03675 appD 746928..747914 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  IRJ27_RS03680 yjaZ 748106..748891 (-) 786 WP_003232967.1 DUF2268 domain-containing protein -
  IRJ27_RS03685 fabF 748967..750208 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  IRJ27_RS03690 fabH 750231..751169 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  IRJ27_RS03695 yjzB 751334..751573 (+) 240 WP_003232972.1 spore coat protein YjzB -
  IRJ27_RS03700 comZ 751603..751794 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  IRJ27_RS03705 med 751809..752762 (-) 954 WP_003245494.1 transcriptional regulator Med Regulator
  IRJ27_RS03710 - 752853..753410 (-) 558 WP_003232974.1 hypothetical protein -
  IRJ27_RS03715 - 753492..754226 (-) 735 WP_003245223.1 hypothetical protein -
  IRJ27_RS03720 yjzD 754475..754660 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  IRJ27_RS03725 yjzC 754706..754885 (-) 180 WP_003245356.1 YjzC family protein -
  IRJ27_RS03730 argF 754971..755930 (-) 960 WP_003232980.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=499367 IRJ27_RS03700 WP_003224559.1 751603..751794(-) (comZ) [Bacillus subtilis strain N1303-2Ay]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=499367 IRJ27_RS03700 WP_003224559.1 751603..751794(-) (comZ) [Bacillus subtilis strain N1303-2Ay]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1