Detailed information NTG0499307

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: IRJ26_RS09660
• Genome accession: NZ_CP064094
• Coordinates: 1838953..1840098 (-)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain N1108-5at
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1833953..1845098

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IRJ26_RS09635	pbpG	1834206..1836281 (-)	2076	WP_003227540.1	transglycosylase domain-containing protein	-
IRJ26_RS09640	speE	1836483..1837313 (+)	831	WP_003227543.1	spermidine synthase	-
IRJ26_RS09645	speB	1837374..1838246 (+)	873	WP_003227545.1	agmatinase	-
IRJ26_RS09650	ywhH	1838278..1838751 (-)	474	WP_003227547.1	YbaK/EbsC family protein	-
IRJ26_RS09655	phrF	1838850..1838969 (-)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
IRJ26_RS09660	rapF	1838953..1840098 (-)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
IRJ26_RS09665	-	1840101..1840331 (+)	231	WP_009968328.1	hypothetical protein	-
IRJ26_RS09670	ywhK	1840328..1841683 (+)	1356	WP_003227552.1	YncE family protein	-
IRJ26_RS09675	ywhL	1841722..1843098 (+)	1377	WP_003244415.1	YncE family protein	-
IRJ26_RS09680	albG	1843104..1843805 (-)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
IRJ26_RS09685	albF	1843802..1845082 (-)	1281	WP_003242974.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=499307 IRJ26_RS09660 WP_003227549.1 1838953..1840098(-) (rapF) [Bacillus subtilis strain N1108-5at]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=499307 IRJ26_RS09660 WP_003227549.1 1838953..1840098(-) (rapF) [Bacillus subtilis strain N1108-5at]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572