Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   IRJ26_RS05540 Genome accession   NZ_CP064094
Coordinates   1037219..1038169 (-) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus subtilis strain N1108-5at     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1032219..1043169
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ26_RS05520 ycnB 1033087..1034505 (+) 1419 WP_003246604.1 MDR family MFS transporter -
  IRJ26_RS05525 yclQ 1034552..1035505 (-) 954 WP_003246619.1 petrobactin ABC transporter substrate-binding protein YclQ -
  IRJ26_RS05530 yclP 1035527..1036285 (-) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  IRJ26_RS05535 yclO 1036279..1037226 (-) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  IRJ26_RS05540 ceuB 1037219..1038169 (-) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  IRJ26_RS05545 thrD 1038554..1039918 (+) 1365 WP_003234493.1 aspartate kinase -
  IRJ26_RS05550 yczN 1040072..1040185 (+) 114 WP_003234495.1 YjcZ family sporulation protein -
  IRJ26_RS05555 yczM 1040267..1040356 (+) 90 WP_015482794.1 YjcZ family sporulation protein -
  IRJ26_RS05560 phrC 1040456..1040578 (-) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  IRJ26_RS05565 rapC 1040562..1041710 (-) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=499291 IRJ26_RS05540 WP_003234491.1 1037219..1038169(-) (ceuB) [Bacillus subtilis strain N1108-5at]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=499291 IRJ26_RS05540 WP_003234491.1 1037219..1038169(-) (ceuB) [Bacillus subtilis strain N1108-5at]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522