Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   IRJ24_RS21335 Genome accession   NZ_CP064093
Coordinates   4062056..4062247 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain N1282-4at     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4057056..4067247
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ24_RS21310 appD 4057381..4058367 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  IRJ24_RS21315 yjaZ 4058559..4059344 (-) 786 WP_003232967.1 DUF2268 domain-containing protein -
  IRJ24_RS21320 fabF 4059420..4060661 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  IRJ24_RS21325 fabH 4060684..4061622 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  IRJ24_RS21330 yjzB 4061787..4062026 (+) 240 WP_003232972.1 spore coat protein YjzB -
  IRJ24_RS21335 comZ 4062056..4062247 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  IRJ24_RS21340 med 4062262..4063215 (-) 954 WP_003245494.1 transcriptional regulator Med Regulator
  IRJ24_RS21345 - 4063306..4063863 (-) 558 WP_003232974.1 hypothetical protein -
  IRJ24_RS21350 - 4063945..4064679 (-) 735 WP_003245223.1 hypothetical protein -
  IRJ24_RS21355 yjzD 4064928..4065113 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  IRJ24_RS21360 yjzC 4065159..4065338 (-) 180 WP_003245356.1 YjzC family protein -
  IRJ24_RS21365 argF 4065424..4066383 (-) 960 WP_003232980.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=499260 IRJ24_RS21335 WP_003224559.1 4062056..4062247(-) (comZ) [Bacillus subtilis strain N1282-4at]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=499260 IRJ24_RS21335 WP_003224559.1 4062056..4062247(-) (comZ) [Bacillus subtilis strain N1282-4at]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1