Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   IRJ24_RS21225 Genome accession   NZ_CP064093
Coordinates   4040119..4040775 (-) Length   218 a.a.
NCBI ID   WP_003245194.1    Uniprot ID   A0AAE2VF25
Organism   Bacillus subtilis strain N1282-4at     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 4035119..4045775
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ24_RS21200 spxH 4035330..4036229 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  IRJ24_RS21205 - 4036543..4036710 (+) 168 WP_003244944.1 hypothetical protein -
  IRJ24_RS21210 pepF 4036748..4038577 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  IRJ24_RS21215 coiA 4038807..4039928 (-) 1122 WP_010886479.1 competence protein CoiA Machinery gene
  IRJ24_RS21220 - 4040002..4040124 (+) 123 WP_003245684.1 hypothetical protein -
  IRJ24_RS21225 mecA 4040119..4040775 (-) 657 WP_003245194.1 adaptor protein MecA Regulator
  IRJ24_RS21230 - 4040742..4040882 (-) 141 WP_119122854.1 hypothetical protein -
  IRJ24_RS21235 yjbE 4041052..4041708 (+) 657 WP_003232944.1 TerC family protein -
  IRJ24_RS21240 spx 4041751..4042146 (-) 396 WP_003245483.1 transcriptional regulator Spx -
  IRJ24_RS21245 yjbC 4042327..4042905 (-) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  IRJ24_RS21250 yjbB 4043069..4044286 (-) 1218 WP_010886478.1 MFS transporter -
  IRJ24_RS21255 oppF 4044393..4045310 (-) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25763.69 Da        Isoelectric Point: 4.1174

>NTDB_id=499257 IRJ24_RS21225 WP_003245194.1 4040119..4040775(-) (mecA) [Bacillus subtilis strain N1282-4at]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSKLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=499257 IRJ24_RS21225 WP_003245194.1 4040119..4040775(-) (mecA) [Bacillus subtilis strain N1282-4at]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAAATTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

100

100

1