Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   IRJ24_RS21215 Genome accession   NZ_CP064093
Coordinates   4038807..4039928 (-) Length   373 a.a.
NCBI ID   WP_010886479.1    Uniprot ID   O31604
Organism   Bacillus subtilis strain N1282-4at     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 4033807..4044928
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ24_RS21190 cwlQ 4033946..4034680 (+) 735 WP_003245645.1 bifunctional muramidase/murein lytic transglycosylase -
  IRJ24_RS21195 yjbI 4034935..4035333 (+) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  IRJ24_RS21200 spxH 4035330..4036229 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  IRJ24_RS21205 - 4036543..4036710 (+) 168 WP_003244944.1 hypothetical protein -
  IRJ24_RS21210 pepF 4036748..4038577 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  IRJ24_RS21215 coiA 4038807..4039928 (-) 1122 WP_010886479.1 competence protein CoiA Machinery gene
  IRJ24_RS21220 - 4040002..4040124 (+) 123 WP_003245684.1 hypothetical protein -
  IRJ24_RS21225 mecA 4040119..4040775 (-) 657 WP_003245194.1 adaptor protein MecA Regulator
  IRJ24_RS21230 - 4040742..4040882 (-) 141 WP_119122854.1 hypothetical protein -
  IRJ24_RS21235 yjbE 4041052..4041708 (+) 657 WP_003232944.1 TerC family protein -
  IRJ24_RS21240 spx 4041751..4042146 (-) 396 WP_003245483.1 transcriptional regulator Spx -
  IRJ24_RS21245 yjbC 4042327..4042905 (-) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  IRJ24_RS21250 yjbB 4043069..4044286 (-) 1218 WP_010886478.1 MFS transporter -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43689.70 Da        Isoelectric Point: 10.1187

>NTDB_id=499256 IRJ24_RS21215 WP_010886479.1 4038807..4039928(-) (coiA) [Bacillus subtilis strain N1282-4at]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKETNRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRSECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=499256 IRJ24_RS21215 WP_010886479.1 4038807..4039928(-) (coiA) [Bacillus subtilis strain N1282-4at]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCGCCATAGACATCGAGCCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACGCAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGGTAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTCCGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB O31604

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

100

100

1