Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   IRJ21_RS20135 Genome accession   NZ_CP064091
Coordinates   1577043..1578074 (-) Length   343 a.a.
NCBI ID   WP_341275238.1    Uniprot ID   -
Organism   Bacillus velezensis strain C1     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1572043..1583074
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ21_RS07410 - 1572503..1572934 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  IRJ21_RS07415 - 1572934..1573275 (+) 342 WP_022553706.1 Na(+)/H(+) antiporter subunit C -
  IRJ21_RS07420 - 1573268..1574749 (+) 1482 WP_021495363.1 Na+/H+ antiporter subunit D -
  IRJ21_RS07425 - 1574755..1575231 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  IRJ21_RS07430 - 1575231..1575515 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  IRJ21_RS07435 mnhG 1575499..1575873 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  IRJ21_RS07440 - 1575913..1576296 (-) 384 WP_065180456.1 hotdog fold thioesterase -
  IRJ21_RS07445 comA 1576318..1576962 (-) 645 WP_014418762.1 response regulator transcription factor Regulator
  IRJ21_RS20135 comP 1577043..1578074 (-) 1032 WP_341275238.1 sensor histidine kinase Regulator
  IRJ21_RS07455 comX 1579364..1579540 (-) 177 WP_017419424.1 competence pheromone ComX -
  IRJ21_RS07460 - 1579555..1580451 (-) 897 WP_017419425.1 polyprenyl synthetase family protein -
  IRJ21_RS07465 degQ 1580582..1580722 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  IRJ21_RS07470 - 1581187..1581528 (+) 342 WP_014418765.1 hypothetical protein -
  IRJ21_RS07475 - 1581535..1582758 (-) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 343 a.a.        Molecular weight: 39380.30 Da        Isoelectric Point: 5.1765

>NTDB_id=499109 IRJ21_RS20135 WP_341275238.1 1577043..1578074(-) (comP) [Bacillus velezensis strain C1]
MKKTILDVLPVSKAYIFEINSDGDILYFDKQNSEPNWQPYKKEFVKVTSEIGKIIEVNQGFLMKIGERGANSYVLLCLSS
INTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQDLKQQGSNPVWLKKLMFTIEEKQRSDLARDLHDSVLQDLIS
LKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGLVKAVSKLAAQQQERAPFHIRLNT
GRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGCNQEEGGGQSMSMGLSGIKERVRA
LDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 1032 bp        

>NTDB_id=499109 IRJ21_RS20135 WP_341275238.1 1577043..1578074(-) (comP) [Bacillus velezensis strain C1]
TTGAAAAAGACTATTTTGGACGTCTTGCCTGTTAGTAAAGCTTATATATTTGAAATCAATTCTGACGGAGACATTCTGTA
TTTTGATAAACAGAACAGTGAACCGAACTGGCAGCCGTATAAAAAAGAATTTGTTAAAGTCACATCAGAGATTGGCAAGA
TTATTGAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGAAAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGC
ATTAATACTCCAAGACTGACAAGAGATGAGATATCTTGGTTAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAA
CATATTGCAGATCGAAGAACTCATGAACCATTTACAAGATCTAAAGCAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGC
TGATGTTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCT
TTGAAGCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCA
TCAGATGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGTCCTCAGCTGCTGTATG
ATTTGGGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACG
GGCCGGTTTACGGCGGCACTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCAT
GAAGCATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACG
GTGTCGGCTGCAATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCAGGTATTAAGGAGCGTGTCCGGGCG
CTTGACGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(143-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

80.523

100

0.808