Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ISP08_RS06510 | Genome accession | NZ_CP064056 |
| Coordinates | 1332200..1333174 (+) | Length | 324 a.a. |
| NCBI ID | WP_195718090.1 | Uniprot ID | - |
| Organism | Staphylococcus lloydii strain 23_2_7_LY | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1327200..1338174
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ISP08_RS06475 (ISP08_06475) | rpmG | 1327745..1327894 (+) | 150 | WP_002483181.1 | 50S ribosomal protein L33 | - |
| ISP08_RS06480 (ISP08_06480) | - | 1328022..1328558 (+) | 537 | WP_195718084.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| ISP08_RS06485 (ISP08_06485) | - | 1328573..1330015 (+) | 1443 | WP_195718085.1 | rhomboid family intramembrane serine protease | - |
| ISP08_RS06490 (ISP08_06490) | - | 1330016..1330216 (+) | 201 | WP_195718086.1 | YqgQ family protein | - |
| ISP08_RS06495 (ISP08_06495) | - | 1330217..1331203 (+) | 987 | WP_195718087.1 | glucokinase | - |
| ISP08_RS06500 (ISP08_06500) | - | 1331203..1331541 (+) | 339 | WP_195718088.1 | MTH1187 family thiamine-binding protein | - |
| ISP08_RS06505 (ISP08_06505) | - | 1331528..1332151 (+) | 624 | WP_195718089.1 | MBL fold metallo-hydrolase | - |
| ISP08_RS06510 (ISP08_06510) | comGA | 1332200..1333174 (+) | 975 | WP_195718090.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ISP08_RS06515 (ISP08_06515) | comGB | 1333146..1334213 (+) | 1068 | WP_244138694.1 | competence type IV pilus assembly protein ComGB | - |
| ISP08_RS06520 (ISP08_06520) | comGC | 1334227..1334535 (+) | 309 | WP_195718091.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ISP08_RS06525 (ISP08_06525) | comGD | 1334516..1334956 (+) | 441 | WP_244138695.1 | competence type IV pilus minor pilin ComGD | - |
| ISP08_RS06530 (ISP08_06530) | - | 1334943..1335248 (+) | 306 | WP_195718093.1 | hypothetical protein | - |
| ISP08_RS06535 (ISP08_06535) | - | 1335241..1335636 (+) | 396 | WP_195718094.1 | ComGF family competence protein | - |
| ISP08_RS06540 (ISP08_06540) | - | 1335804..1336316 (+) | 513 | WP_195718095.1 | shikimate kinase | - |
| ISP08_RS06545 (ISP08_06545) | gcvT | 1336482..1337573 (+) | 1092 | WP_195718096.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37094.00 Da Isoelectric Point: 8.7523
>NTDB_id=498845 ISP08_RS06510 WP_195718090.1 1332200..1333174(+) (comGA) [Staphylococcus lloydii strain 23_2_7_LY]
MKLLFNEILNKAITQNSSDIHFIPTDKKVLIKLRVQDELLQHQTITKSLYLKLLTFMKYQANLDVSTSHKAQSGRYIYKH
KELYYLRISTLPLSLGLESCVIRIVPHYFNPQQQPLNLPYLYDFMSKKQGLLLFTGPTGSGKSTSMYNMSMYAKERLNLN
VITIEDPVERIINGITQVSVNEKAGINYQNSFKAILRCDPDVILIGEIRNQLIAKEVLHASLSGHLVLTTMHANNCKGAL
LRLLEMGVTKQELAQSVLCITNQRLVTSNDNQRFLIAEHMNNDDINYFFEHDYKLPANFQSLPKELKSLSEGGVICEDTY
QKYI
MKLLFNEILNKAITQNSSDIHFIPTDKKVLIKLRVQDELLQHQTITKSLYLKLLTFMKYQANLDVSTSHKAQSGRYIYKH
KELYYLRISTLPLSLGLESCVIRIVPHYFNPQQQPLNLPYLYDFMSKKQGLLLFTGPTGSGKSTSMYNMSMYAKERLNLN
VITIEDPVERIINGITQVSVNEKAGINYQNSFKAILRCDPDVILIGEIRNQLIAKEVLHASLSGHLVLTTMHANNCKGAL
LRLLEMGVTKQELAQSVLCITNQRLVTSNDNQRFLIAEHMNNDDINYFFEHDYKLPANFQSLPKELKSLSEGGVICEDTY
QKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=498845 ISP08_RS06510 WP_195718090.1 1332200..1333174(+) (comGA) [Staphylococcus lloydii strain 23_2_7_LY]
TTGAAATTATTGTTCAACGAAATACTTAATAAAGCTATTACTCAGAATAGTTCTGACATACATTTTATTCCGACTGATAA
AAAAGTGTTAATTAAATTGCGAGTGCAAGATGAGTTACTTCAGCATCAAACGATAACAAAGAGTTTATACTTAAAACTCT
TAACTTTTATGAAATATCAAGCCAATTTAGATGTATCGACAAGTCATAAAGCACAAAGTGGTAGATATATTTATAAACAT
AAAGAGTTATATTATCTACGCATCTCAACATTACCTCTATCACTTGGTTTAGAAAGTTGTGTTATTCGTATTGTGCCACA
CTACTTTAATCCCCAGCAACAACCTTTAAATTTGCCTTATTTATATGATTTCATGAGTAAAAAACAAGGTTTATTACTGT
TCACTGGTCCAACAGGTTCTGGCAAAAGCACAAGTATGTATAATATGTCGATGTACGCAAAAGAACGACTCAATTTGAAT
GTTATTACAATTGAGGATCCTGTTGAACGTATTATTAATGGCATCACTCAAGTTTCAGTAAATGAGAAAGCTGGTATTAA
TTATCAAAATTCGTTTAAAGCTATACTACGTTGTGACCCTGATGTGATATTAATTGGAGAAATTAGAAACCAATTAATCG
CAAAAGAAGTCTTACATGCAAGTTTAAGTGGTCATTTAGTTTTAACGACAATGCATGCAAATAATTGTAAAGGCGCATTA
TTAAGATTGCTAGAAATGGGTGTAACCAAACAAGAATTAGCACAATCTGTACTCTGCATTACAAATCAAAGACTTGTCAC
TTCTAATGATAACCAAAGATTCTTAATAGCTGAGCATATGAATAATGATGATATTAATTATTTCTTTGAACATGACTATA
AGTTGCCCGCAAATTTTCAAAGCTTGCCAAAGGAATTAAAATCTTTGTCAGAAGGGGGGGTCATTTGTGAGGATACTTAC
CAAAAGTATATTTAG
TTGAAATTATTGTTCAACGAAATACTTAATAAAGCTATTACTCAGAATAGTTCTGACATACATTTTATTCCGACTGATAA
AAAAGTGTTAATTAAATTGCGAGTGCAAGATGAGTTACTTCAGCATCAAACGATAACAAAGAGTTTATACTTAAAACTCT
TAACTTTTATGAAATATCAAGCCAATTTAGATGTATCGACAAGTCATAAAGCACAAAGTGGTAGATATATTTATAAACAT
AAAGAGTTATATTATCTACGCATCTCAACATTACCTCTATCACTTGGTTTAGAAAGTTGTGTTATTCGTATTGTGCCACA
CTACTTTAATCCCCAGCAACAACCTTTAAATTTGCCTTATTTATATGATTTCATGAGTAAAAAACAAGGTTTATTACTGT
TCACTGGTCCAACAGGTTCTGGCAAAAGCACAAGTATGTATAATATGTCGATGTACGCAAAAGAACGACTCAATTTGAAT
GTTATTACAATTGAGGATCCTGTTGAACGTATTATTAATGGCATCACTCAAGTTTCAGTAAATGAGAAAGCTGGTATTAA
TTATCAAAATTCGTTTAAAGCTATACTACGTTGTGACCCTGATGTGATATTAATTGGAGAAATTAGAAACCAATTAATCG
CAAAAGAAGTCTTACATGCAAGTTTAAGTGGTCATTTAGTTTTAACGACAATGCATGCAAATAATTGTAAAGGCGCATTA
TTAAGATTGCTAGAAATGGGTGTAACCAAACAAGAATTAGCACAATCTGTACTCTGCATTACAAATCAAAGACTTGTCAC
TTCTAATGATAACCAAAGATTCTTAATAGCTGAGCATATGAATAATGATGATATTAATTATTTCTTTGAACATGACTATA
AGTTGCCCGCAAATTTTCAAAGCTTGCCAAAGGAATTAAAATCTTTGTCAGAAGGGGGGGTCATTTGTGAGGATACTTAC
CAAAAGTATATTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
60.185 |
100 |
0.602 |
| comGA | Staphylococcus aureus N315 |
60.185 |
100 |
0.602 |