Detailed information NTG0498517

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ISN74_RS02760
• Genome accession: NZ_CP064030
• Coordinates: 669419..670849 (-)
• Length: 476 a.a.
• NCBI ID: WP_188797181.1
• Uniprot ID: -
• Organism: Dyella caseinilytica strain DHOB09
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 664419..675849

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ISN74_RS02745 (ISN74_02745)	-	665384..667231 (+)	1848	WP_229678962.1	ATP-binding protein	-
ISN74_RS02750 (ISN74_02750)	-	667228..667674 (+)	447	WP_188797178.1	response regulator	-
ISN74_RS02755 (ISN74_02755)	-	667798..669366 (+)	1569	WP_188797180.1	response regulator	-
ISN74_RS02760 (ISN74_02760)	pilR	669419..670849 (-)	1431	WP_188797181.1	sigma-54 dependent transcriptional regulator	Regulator
ISN74_RS02765 (ISN74_02765)	-	670990..672051 (-)	1062	WP_188797184.1	alpha/beta hydrolase	-
ISN74_RS02770 (ISN74_02770)	-	672143..673798 (-)	1656	WP_188797185.1	trehalase family glycosidase	-

Sequence

Protein

• Length: 476 a.a.
• Molecular weight: 52142.61 Da
• Isoelectric Point: 6.3817

>NTDB_id=498517 ISN74_RS02760 WP_188797181.1 669419..670849(-) (pilR) [Dyella caseinilytica strain DHOB09]
MSQQTVLVIDDERDIRELLTITLGRMDLKVDAVGTVAEARHALAEHHYDLCFTDMRLPDGSGQEVIELIAAEYDETPVAM
ITAYGNVDAAVTALKAGAFDFVSKPVDIQMLRRLVRTALKLAEEKRSGAAPASTATSSSDRLIGDSAVMQQVRSTIGKLA
RNQAPVYIAGESGVGKELVARLIHEQGPRASGPFVPVNCGAIPSELMESEFFGHRKGSFTGAVADKEGLFQAAHGGTLFL
DEVAELPLHMQVKLLRAIQEKAVRPIGAREEVTVDVRILSATHKNLAALVEQGQFRQDLFYRINVIELRVPPLRERRGDV
PLLADFVLRQLATKSRSETPARLLPEARQALEDYDFPGNVRELENILERAVAMCDGDRIDTTDLMLPQRPSRHNTEAPAA
HAHHAPPVYANAPVAPAAPAQTPSSELGLDDYISNLERTAIMKALEESRYNKTAAARKLGITFRALRYKLKKLGID

Nucleotide

• Length: 1431 bp

>NTDB_id=498517 ISN74_RS02760 WP_188797181.1 669419..670849(-) (pilR) [Dyella caseinilytica strain DHOB09]
ATGAGCCAACAGACCGTCCTGGTCATCGACGACGAACGCGATATCCGCGAACTGCTGACTATCACCCTTGGCCGCATGGA
CCTTAAGGTCGATGCCGTCGGCACTGTGGCCGAAGCGCGCCACGCGCTCGCCGAGCATCATTACGACCTGTGCTTCACCG
ATATGCGCCTGCCTGACGGCAGCGGCCAGGAGGTGATCGAGCTGATCGCCGCCGAATACGACGAGACGCCGGTGGCGATG
ATCACCGCTTATGGCAACGTCGACGCCGCGGTGACAGCGTTGAAGGCCGGCGCCTTCGACTTCGTGTCCAAGCCGGTGGA
TATCCAGATGCTGCGGCGGCTGGTCCGCACGGCGCTGAAGCTGGCCGAGGAGAAGCGTTCCGGCGCCGCTCCCGCCAGCA
CAGCAACCTCATCCAGCGACCGCCTGATCGGTGACTCGGCGGTCATGCAGCAGGTGCGCAGCACGATCGGCAAGCTGGCC
CGTAACCAGGCGCCGGTGTACATCGCCGGTGAATCCGGCGTCGGCAAGGAACTGGTCGCGCGGCTGATTCACGAACAAGG
TCCGCGCGCCAGCGGGCCGTTCGTGCCGGTCAACTGCGGCGCCATTCCTTCGGAACTGATGGAAAGCGAATTCTTCGGCC
ATCGCAAAGGCAGCTTCACCGGCGCCGTGGCCGACAAGGAAGGCCTGTTCCAGGCTGCCCACGGCGGCACGTTGTTCCTG
GACGAAGTCGCCGAGTTGCCGCTGCACATGCAGGTGAAGCTGCTGCGCGCGATCCAGGAAAAGGCGGTGCGCCCGATCGG
TGCACGCGAGGAAGTCACGGTCGACGTGCGCATCCTGTCGGCTACCCACAAAAATCTTGCGGCGCTGGTCGAACAAGGTC
AGTTCCGCCAAGACTTATTCTATCGCATCAATGTCATCGAACTGCGCGTGCCGCCGCTGCGCGAGCGCCGCGGCGACGTA
CCCTTGCTGGCCGATTTCGTGTTGCGCCAGCTGGCGACAAAAAGCCGCAGCGAAACACCCGCCCGCCTGCTTCCCGAAGC
GCGCCAGGCGCTGGAGGATTACGATTTCCCCGGCAATGTGCGCGAGCTGGAAAACATCCTGGAACGCGCCGTAGCCATGT
GCGACGGCGACCGCATCGACACCACGGATCTGATGCTGCCGCAGCGCCCGTCGCGTCACAACACGGAAGCGCCGGCCGCG
CACGCTCACCACGCCCCGCCGGTTTATGCGAATGCGCCCGTGGCTCCCGCCGCACCCGCGCAAACGCCATCGAGCGAACT
GGGACTGGACGACTACATCAGCAATCTTGAACGCACCGCGATCATGAAGGCGCTGGAGGAGTCCCGCTACAACAAGACGG
CGGCGGCGCGGAAGCTGGGCATTACGTTCCGGGCGTTGCGCTACAAGCTCAAGAAGCTCGGCATCGATTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (434-473)

• Sigma-54 interaction domain (Sigma54_activat) (142-308)

• Response regulator receiver domain (Response_reg) (6-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	59.874	100	0.599
pilR	Acinetobacter baumannii strain A118	48.95	100	0.49