Detailed information NTG0498490

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: IGI30_RS20800
• Genome accession: NZ_CP075480
• Coordinates: 4342836..4343861 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain NT1N31
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4337836..4348861

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IGI30_RS20780	metJ	4338897..4339214 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
IGI30_RS20785	yiiX	4339398..4340006 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
IGI30_RS20790	rpmE	4340067..4340279 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
IGI30_RS20795	priA	4340482..4342680 (+)	2199	WP_001424430.1	primosomal protein N'	Machinery gene
IGI30_RS20800	cytR	4342836..4343861 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
IGI30_RS20805	ftsN	4343953..4344912 (+)	960	WP_000068828.1	cell division protein FtsN	-
IGI30_RS20810	hslV	4345005..4345535 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
IGI30_RS20815	hslU	4345545..4346876 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
IGI30_RS20820	menA	4346943..4347869 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
IGI30_RS20825	rraA	4347962..4348447 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
IGI30_RS20830	zapB	4348532..4348777 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=498490 IGI30_RS20800 WP_000644904.1 4342836..4343861(+) (cytR) [Escherichia coli strain NT1N31]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=498490 IGI30_RS20800 WP_000644904.1 4342836..4343861(+) (cytR) [Escherichia coli strain NT1N31]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628