Detailed information NTG0498254

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: IGI24_RS22420
• Genome accession: NZ_CP075472
• Coordinates: 4442207..4443616 (+)
• Length: 469 a.a.
• NCBI ID: WP_001188775.1
• Uniprot ID: -
• Organism: Escherichia coli strain NT1F25
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 4437207..4448616

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IGI24_RS22405	typA	4437255..4439078 (-)	1824	WP_000570668.1	ribosome-dependent GTPase TypA	-
IGI24_RS22410	glnA	4439451..4440860 (+)	1410	WP_001271717.1	glutamate--ammonia ligase	-
IGI24_RS22415	glnL	4441146..4442195 (+)	1050	WP_000190577.1	nitrogen regulation protein NR(II)	-
IGI24_RS22420	luxO	4442207..4443616 (+)	1410	WP_001188775.1	nitrogen regulation protein NR(I)	Regulator
IGI24_RS22425	yshB	4443728..4443838 (+)	111	WP_000893994.1	YshB family small membrane protein	-
IGI24_RS22430	hemN	4444028..4445401 (-)	1374	WP_000116090.1	oxygen-independent coproporphyrinogen III oxidase	-
IGI24_RS22435	yihI	4445590..4446096 (-)	507	WP_001300530.1	Der GTPase-activating protein YihI	-
IGI24_RS23475	-	4446215..4446381 (-)	167	Protein_4291	hypothetical protein	-
IGI24_RS22440	yihA	4446678..4447310 (+)	633	WP_000183349.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-

Sequence

Protein

• Length: 469 a.a.
• Molecular weight: 52249.72 Da
• Isoelectric Point: 6.4081

>NTDB_id=498254 IGI24_RS22420 WP_001188775.1 4442207..4443616(+) (luxO) [Escherichia coli strain NT1F25]
MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVII
MTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQPRNIQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDE
IGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPR
LARHFLQVAAHELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPD
SWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME

Nucleotide

• Length: 1410 bp

>NTDB_id=498254 IGI24_RS22420 WP_001188775.1 4442207..4443616(+) (luxO) [Escherichia coli strain NT1F25]
ATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGTTGGGTGCTTGAACGTGCGCTCGCTGGAGCGGG
TTTAACCTGTACGACATTTGAGAACGGCGCGGAAGTACTGGAGGCGCTGGCGAGCAAAACGCCGGATGTGCTGCTTTCAG
ATATCCGTATGCCGGGAATGGACGGGCTGGCGCTGCTCAAGCAGATTAAACAGCGCCATCCAATGCTTCCGGTCATCATT
ATGACCGCACATTCCGATCTGGATGCTGCCGTCAGCGCCTATCAACAAGGGGCGTTTGATTATCTGCCCAAACCGTTTGA
TATCGACGAAGCAGTGGCGCTGGTTGAGCGCGCTATCAGTCATTACCAGGAACAGCAGCAGCCGCGTAATATTCAGCTTA
ACGGCCCAACGACCGATATCATCGGCGAAGCGCCAGCCATGCAGGACGTGTTCCGTATTATTGGTCGGCTTTCGCGTTCT
TCTATTAGCGTGCTGATTAACGGCGAATCCGGCACCGGTAAAGAACTGGTCGCTCATGCCCTGCATCGCCACAGTCCGCG
CGCCAAAGCGCCGTTTATCGCGCTGAATATGGCAGCTATCCCAAAAGATTTGATCGAATCAGAACTGTTTGGCCACGAGA
AAGGCGCGTTTACTGGCGCGAATACCATTCGTCAGGGGCGTTTTGAACAGGCCGATGGCGGTACATTATTCCTCGACGAA
ATTGGTGATATGCCGCTGGATGTGCAGACGCGTTTGCTGCGCGTGCTGGCAGACGGTCAGTTTTACCGCGTTGGCGGCTA
TGCGCCGGTGAAAGTGGATGTGCGGATTATCGCTGCCACTCACCAGAATCTCGAACAGCGAGTGCAGGAAGGTAAGTTCC
GTGAGGATCTGTTCCACCGCCTGAACGTTATCCGCGTTCATCTGCCGCCGCTGCGCGAACGTCGGGAAGATATTCCCCGT
CTGGCGCGCCATTTTTTACAGGTTGCCGCGCACGAACTGGGCGTAGAAGCGAAGTTACTGCATCCGGAAACCGAAGCTGC
TCTGACGCGTCTGGCGTGGCCAGGCAACGTGCGCCAGCTGGAAAACACCTGCCGCTGGCTAACGGTGATGGCCGCCGGGC
AGGAAGTGTTGATTCAGGATTTGCCCGGCGAACTGTTTGAATCAACGGTTGCGGAGAGTACTTCGCAAATGCAACCGGAC
AGTTGGGCGACGCTTCTTGCGCAGTGGGCAGACAGAGCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGCC
AGAGCTGGAGCGGACGTTACTGACGACCGCGTTGCGACATACGCAGGGGCATAAACAGGAAGCGGCGCGGCTACTCGGCT
GGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGATGGAGTGA

Domains

Predicted by InterProScan.

• Bacterial regulatory protein, Fis family (HTH_8) (427-466)

• Response regulator receiver domain (Response_reg) (6-115)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	39.871	98.934	0.394
pilR	Pseudomonas aeruginosa PAK	39.066	100	0.392