Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SSUD12_RS09550 Genome accession   NC_017621
Coordinates   1925988..1927247 (-) Length   419 a.a.
NCBI ID   WP_014638691.1    Uniprot ID   -
Organism   Streptococcus suis D12     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1920988..1932247
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSUD12_RS09530 (SSUD12_1928) dhaL 1921760..1922335 (+) 576 WP_014638688.1 dihydroxyacetone kinase subunit DhaL -
  SSUD12_RS09535 (SSUD12_1929) dhaM 1922332..1922706 (+) 375 WP_002938758.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  SSUD12_RS09540 (SSUD12_1930) - 1922716..1923426 (+) 711 WP_014638689.1 MIP/aquaporin family protein -
  SSUD12_RS09545 (SSUD12_1931) - 1923649..1925511 (-) 1863 WP_041179232.1 proline--tRNA ligase -
  SSUD12_RS09550 (SSUD12_1932) eeP 1925988..1927247 (-) 1260 WP_014638691.1 M50 family metallopeptidase Regulator
  SSUD12_RS09555 (SSUD12_1933) - 1927257..1928063 (-) 807 WP_014638692.1 phosphatidate cytidylyltransferase -
  SSUD12_RS09560 (SSUD12_1934) - 1928073..1928828 (-) 756 WP_013730586.1 isoprenyl transferase -
  SSUD12_RS09565 (SSUD12_1935) yajC 1928942..1929265 (-) 324 WP_014638693.1 preprotein translocase subunit YajC -
  SSUD12_RS09570 (SSUD12_1936) - 1929375..1930667 (-) 1293 WP_002937782.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44875.14 Da        Isoelectric Point: 5.4378

>NTDB_id=49804 SSUD12_RS09550 WP_014638691.1 1925988..1927247(-) (eeP) [Streptococcus suis D12]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGNDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFILLFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKNRHVSVTAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=49804 SSUD12_RS09550 WP_014638691.1 1925988..1927247(-) (eeP) [Streptococcus suis D12]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTTGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAATGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCCTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTCGAGGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGATGCCACGATTGTAGAGGAAGATGGGACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCGGGTCCCATGAATAACTTTATTTTAGGGATTCTAGTATT
TATTCTTTTGTTCTTCATGCAAGGCGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCTGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGTAAAGCAGCAACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTCGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGGCCTATCGAATTGGTATTTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTAACAGCTTTGAAGAACCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCGGCTGAGTTTGGTTTGGTCTCTGTGTT
GGGGCTGATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

64.762

100

0.649

  eeP Streptococcus thermophilus LMD-9

64.762

100

0.649


Multiple sequence alignment