Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   KIL00_RS21660 Genome accession   NZ_CP075344
Coordinates   4148364..4149158 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis subsp. subtilis strain A1 - Midalam     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4143364..4154158
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIL00_RS21635 (KIL00_21635) rocD 4143817..4145022 (-) 1206 WP_033882007.1 ornithine aminotransferase -
  KIL00_RS21640 (KIL00_21640) rocR 4145260..4146645 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  KIL00_RS21645 (KIL00_21645) - 4146627..4146815 (-) 189 Protein_4228 ATP-binding protein -
  KIL00_RS21650 (KIL00_21650) - 4146932..4147060 (-) 129 WP_213783517.1 hypothetical protein -
  KIL00_RS21655 (KIL00_21655) htrA 4147080..4148282 (-) 1203 WP_014481472.1 serine protease HtrC Regulator
  KIL00_RS21660 (KIL00_21660) vicX 4148364..4149158 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  KIL00_RS21665 (KIL00_21665) walI 4149180..4150022 (-) 843 WP_014481473.1 WalRK two-component regulatory system regulator WalI -
  KIL00_RS21670 (KIL00_21670) walH 4150009..4151376 (-) 1368 WP_014481474.1 WalRK two-component regulatory system regulator WalH -
  KIL00_RS21675 (KIL00_21675) walK 4151366..4153201 (-) 1836 WP_213783518.1 cell wall metabolism sensor histidine kinase WalK -
  KIL00_RS21680 (KIL00_21680) walR 4153209..4153916 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=497862 KIL00_RS21660 WP_003226939.1 4148364..4149158(-) (vicX) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=497862 KIL00_RS21660 WP_003226939.1 4148364..4149158(-) (vicX) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTTGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGGAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTGGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGGAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAAAC
AGTGAAGTCGTTCGGCGGACTTGATGTTGAATCATTTGGCGTTTCCCACGATGCGGCCGAGCCGATGTTTTATGTATTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCATGATGTCGGCATGCTGCAAATGGGAAGATACCCGTGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53