Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   SSUD9_RS09555 Genome accession   NC_017620
Coordinates   1953706..1954965 (-) Length   419 a.a.
NCBI ID   WP_014637190.1    Uniprot ID   -
Organism   Streptococcus suis D9     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1948706..1959965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSUD9_RS09540 (SSUD9_1978) - 1948950..1949660 (+) 711 WP_014637188.1 MIP/aquaporin family protein -
  SSUD9_RS09545 (SSUD9_1979) - 1950170..1951372 (-) 1203 WP_002935295.1 IS110-like element ISSsu7 family transposase -
  SSUD9_RS09550 (SSUD9_1980) - 1951620..1953482 (-) 1863 WP_024390942.1 proline--tRNA ligase -
  SSUD9_RS09555 (SSUD9_1981) eeP 1953706..1954965 (-) 1260 WP_014637190.1 RIP metalloprotease RseP Regulator
  SSUD9_RS09560 (SSUD9_1982) - 1954975..1955781 (-) 807 WP_014637191.1 phosphatidate cytidylyltransferase -
  SSUD9_RS09565 (SSUD9_1983) - 1955778..1956524 (-) 747 WP_014637192.1 isoprenyl transferase -
  SSUD9_RS09570 (SSUD9_1984) yajC 1956638..1956961 (-) 324 WP_014637193.1 preprotein translocase subunit YajC -
  SSUD9_RS09575 (SSUD9_1985) - 1957071..1958363 (-) 1293 WP_002937782.1 adenylosuccinate synthase -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 44903.20 Da        Isoelectric Point: 5.6974

>NTDB_id=49753 SSUD9_RS09555 WP_014637190.1 1953706..1954965(-) (eeP) [Streptococcus suis D9]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYRVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFIILFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKNRHVSVTAEQVDGAYRIGISPILKTGFVDKIIGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLASVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=49753 SSUD9_RS09555 WP_014637190.1 1953706..1954965(-) (eeP) [Streptococcus suis D9]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTTGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAAGGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCCTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTCGAGGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAGGGTTGATCACGACGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCGGGTCCCATGAATAACTTTATTTTAGGGATTCTAGTATT
TATTATTTTGTTCTTCATGCAAGGCGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCGGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGCAAAGCAGCGACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTTGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGGCCTATCGAATTGGTATTTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTATCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTAACAGCTTTGAAGAACCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCGGCTGAATTTGGTTTGGCTTCTGTATT
GGGGCTAATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-405)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65.238

100

0.654
  eeP Streptococcus thermophilus LMD-9

65.238

100

0.654

Multiple sequence alignment