Detailed information    

insolico Bioinformatically predicted

Overview

Name   comD/comD1   Type   Regulator
Locus tag   KIP81_RS08840 Genome accession   NZ_CP075172
Coordinates   1778531..1779853 (-) Length   440 a.a.
NCBI ID   WP_243602841.1    Uniprot ID   -
Organism   Streptococcus equinus strain SheepZ001     
Function   phosphorylation of ComE (predicted from homology)   
Competence regulation

Genomic Context

Location: 1773531..1784853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP81_RS08805 (KIP81_08795) comD/comD3 1774102..1775118 (-) 1017 WP_243602838.1 GHKL domain-containing protein Regulator
  KIP81_RS08810 (KIP81_08800) comD/comD3 1775487..1776866 (-) 1380 WP_243602839.1 GHKL domain-containing protein Regulator
  KIP81_RS08815 (KIP81_08805) - 1776873..1777070 (-) 198 WP_243602840.1 hypothetical protein -
  KIP81_RS08820 (KIP81_08810) - 1777232..1777525 (-) 294 WP_074630224.1 bacteriocin immunity protein -
  KIP81_RS08825 (KIP81_08815) - 1777556..1777861 (-) 306 WP_134775646.1 bacteriocin immunity protein -
  KIP81_RS08830 (KIP81_08820) - 1777881..1778177 (-) 297 WP_081341079.1 DUF3884 family protein -
  KIP81_RS08835 (KIP81_08825) comC/comC1 1778365..1778514 (+) 150 WP_200769438.1 hypothetical protein Regulator
  KIP81_RS08840 (KIP81_08830) comD/comD1 1778531..1779853 (-) 1323 WP_243602841.1 GHKL domain-containing protein Regulator
  KIP81_RS08845 (KIP81_08835) comE/comE1 1779858..1780589 (-) 732 WP_243602842.1 response regulator transcription factor Regulator
  KIP81_RS08850 (KIP81_08840) - 1781545..1781853 (-) 309 WP_074567284.1 bacteriocin immunity protein -
  KIP81_RS08855 (KIP81_08845) - 1781853..1782104 (-) 252 Protein_1682 garvicin Q family class II bacteriocin -
  KIP81_RS08860 (KIP81_08850) - 1782410..1782583 (+) 174 WP_142349959.1 bacteriocin -
  KIP81_RS08865 (KIP81_08855) - 1782663..1783853 (+) 1191 WP_074630219.1 glycosyltransferase -
  KIP81_RS08870 (KIP81_08860) - 1783870..1784067 (+) 198 WP_074567282.1 bacteriocin -

Sequence

Protein


Download         Length: 440 a.a.        Molecular weight: 50960.69 Da        Isoelectric Point: 5.7536

>NTDB_id=497446 KIP81_RS08840 WP_243602841.1 1778531..1779853(-) (comD/comD1) [Streptococcus equinus strain SheepZ001]
MIKALLIYFASQLVYYPVIMTIFANVRGEKLKLREIVTISLSFFVIDITSFPTIVGRILILFLLSYLNRKDLPLSLHMFN
GSFPWVIDSIIIRTISLFVLPIFGLDYIGLSKNDILFIVVQLSVLLVYFLSIKISKIDFKTFIDISETKLLRKKLVFTDI
TMIFYYVVIEYLTAVDFEEKVPTLIYRQWLVFLYFIFFISMLVYMNRTYQNKLEKEIASAREQELRSLSAYSKQIEGLYE
ELRAFRHDYANILASLKEGIEQNDMGIVRHIYDSVLTDSADFIQNSKFNIGRLANIDDDAIKSLLSAKFLEAEANHIEVN
LEVKDKIGAPEMPLLDYIRILAILCDNAIEAALEAENPAITIACFYQDDDYVLIVDNSTKEENIPVNLIYQKDYSSKGYG
RGIGLKTIHQMMRKYPDLIVQTDSKNYHFCQTIRIKKAFD

Nucleotide


Download         Length: 1323 bp        

>NTDB_id=497446 KIP81_RS08840 WP_243602841.1 1778531..1779853(-) (comD/comD1) [Streptococcus equinus strain SheepZ001]
ATGATAAAAGCGCTTTTGATTTATTTTGCTTCACAGCTTGTTTATTATCCTGTTATCATGACAATTTTTGCGAATGTAAG
AGGAGAAAAGCTAAAATTACGGGAAATTGTAACGATATCATTGTCATTTTTTGTTATTGATATTACATCATTTCCTACTA
TCGTGGGAAGAATATTAATACTATTTTTATTATCATATCTCAATAGAAAAGACTTACCGTTATCCTTACATATGTTCAAT
GGTAGCTTTCCGTGGGTTATTGATAGCATTATTATTAGGACTATTAGTCTTTTTGTTCTTCCAATATTCGGATTAGATTA
TATTGGTCTAAGTAAAAATGATATATTGTTTATCGTTGTACAATTGTCTGTGTTACTGGTTTACTTCTTAAGCATCAAAA
TATCAAAAATCGATTTTAAAACTTTTATTGATATCAGTGAAACAAAATTATTACGTAAAAAATTAGTTTTTACAGATATT
ACAATGATTTTTTATTATGTTGTGATTGAATATTTGACTGCAGTAGATTTTGAAGAGAAAGTGCCAACTTTAATCTATCG
ACAATGGTTAGTTTTTTTATATTTTATATTTTTCATTAGTATGCTTGTTTACATGAACCGCACTTACCAAAATAAGCTTG
AAAAGGAGATTGCTTCAGCGCGTGAGCAAGAGCTGCGTTCGCTGTCTGCTTATAGTAAACAGATTGAGGGCTTGTATGAA
GAATTACGAGCTTTTAGACATGATTATGCCAATATTTTAGCCAGTTTGAAAGAGGGCATTGAGCAGAATGATATGGGGAT
TGTTCGACATATTTATGATTCTGTGTTGACGGATTCAGCTGATTTTATTCAAAATAGTAAGTTTAACATTGGGCGTTTAG
CTAATATCGATGATGATGCGATAAAAAGTTTATTGTCTGCTAAATTTTTGGAAGCTGAGGCTAATCATATTGAGGTCAAT
CTTGAAGTTAAAGATAAGATTGGTGCACCAGAAATGCCACTTTTGGATTATATTCGTATACTTGCTATTTTATGTGATAA
TGCGATTGAAGCTGCGCTTGAGGCAGAAAATCCAGCCATTACGATTGCTTGTTTTTATCAAGATGATGATTATGTGTTAA
TTGTGGATAACTCAACTAAAGAAGAAAATATTCCAGTTAATTTGATTTATCAAAAAGATTATTCAAGTAAAGGGTATGGT
CGAGGTATTGGTCTTAAAACAATTCATCAGATGATGAGAAAATATCCTGACTTAATTGTTCAAACAGATAGTAAAAATTA
TCATTTTTGCCAAACGATACGTATTAAAAAAGCATTCGACTAA

Domains

Predicted by InterProScan.

GHKL domain (HATPase_c_5)

(335-435)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/comD1 Streptococcus equinus JB1

87.069

52.727

0.459