Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   KIP81_RS05745 Genome accession   NZ_CP075172
Coordinates   1148450..1148890 (-) Length   146 a.a.
NCBI ID   WP_243602556.1    Uniprot ID   -
Organism   Streptococcus equinus strain SheepZ001     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1143450..1153890
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP81_RS05735 (KIP81_05735) rcrQ 1144870..1146642 (-) 1773 WP_243602554.1 ABC transporter ATP-binding protein Regulator
  KIP81_RS05740 (KIP81_05740) rcrP 1146632..1148446 (-) 1815 WP_243602555.1 ABC transporter ATP-binding protein Regulator
  KIP81_RS05745 (KIP81_05745) rcrR 1148450..1148890 (-) 441 WP_243602556.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  KIP81_RS05750 (KIP81_05750) - 1149038..1149448 (-) 411 WP_243602557.1 peptide deformylase -
  KIP81_RS05755 (KIP81_05755) - 1149451..1149954 (-) 504 WP_243602558.1 GNAT family N-acetyltransferase -
  KIP81_RS05760 (KIP81_05760) gdhA 1150107..1151456 (-) 1350 WP_021142476.1 NADP-specific glutamate dehydrogenase -
  KIP81_RS05765 (KIP81_05765) - 1151686..1152183 (+) 498 WP_074629507.1 DUF308 domain-containing protein -
  KIP81_RS05770 (KIP81_05770) queF 1152222..1152713 (-) 492 WP_021142478.1 preQ(1) synthase -
  KIP81_RS05775 (KIP81_05775) queE 1152729..1153442 (-) 714 WP_039690525.1 7-carboxy-7-deazaguanine synthase QueE -
  KIP81_RS05780 (KIP81_05780) queD 1153435..1153881 (-) 447 WP_027968631.1 6-carboxytetrahydropterin synthase QueD -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17066.59 Da        Isoelectric Point: 8.5111

>NTDB_id=497417 KIP81_RS05745 WP_243602556.1 1148450..1148890(-) (rcrR) [Streptococcus equinus strain SheepZ001]
MRDKDPFSQLRDFVNLMENRVHELGELHDVENLAGPQGFAVLYLRDNEDKEVFIKDIERKLKISKSVTSNLIKRMEKNGF
IKVVPSEVDKRYKRVVLTELGRAKTKDIDAFHAAVHRQIFDGISREELEISGRVFDRILKNLENKE

Nucleotide


Download         Length: 441 bp        

>NTDB_id=497417 KIP81_RS05745 WP_243602556.1 1148450..1148890(-) (rcrR) [Streptococcus equinus strain SheepZ001]
ATGCGAGATAAAGATCCGTTTTCACAATTAAGAGACTTCGTGAATTTGATGGAAAACCGTGTGCACGAACTCGGTGAACT
TCATGATGTGGAGAACTTAGCTGGTCCGCAGGGATTTGCGGTTTTATATCTGAGAGATAATGAAGACAAAGAAGTTTTCA
TTAAAGATATTGAACGCAAGCTTAAAATTTCAAAATCAGTAACCAGCAATTTGATTAAAAGAATGGAAAAGAATGGTTTT
ATAAAAGTTGTTCCATCTGAAGTTGATAAACGATACAAGCGTGTAGTCCTTACCGAACTTGGTCGAGCTAAGACAAAAGA
TATTGATGCTTTTCACGCTGCGGTTCACAGGCAAATTTTTGATGGCATTAGTCGTGAAGAGCTAGAAATTTCTGGTCGTG
TCTTTGATCGTATTTTGAAAAATTTAGAAAACAAGGAGTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(35-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

51.748

97.945

0.507