Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   KIP81_RS05735 Genome accession   NZ_CP075172
Coordinates   1144870..1146642 (-) Length   590 a.a.
NCBI ID   WP_243602554.1    Uniprot ID   -
Organism   Streptococcus equinus strain SheepZ001     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1139870..1151642
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP81_RS05720 (KIP81_05720) - 1141516..1142364 (+) 849 WP_243602551.1 AraC family transcriptional regulator -
  KIP81_RS05725 (KIP81_05725) - 1142419..1142889 (-) 471 WP_243602552.1 pyridoxamine 5'-phosphate oxidase family protein -
  KIP81_RS05730 (KIP81_05730) - 1142892..1144763 (-) 1872 WP_243602553.1 hypothetical protein -
  KIP81_RS05735 (KIP81_05735) rcrQ 1144870..1146642 (-) 1773 WP_243602554.1 ABC transporter ATP-binding protein Regulator
  KIP81_RS05740 (KIP81_05740) rcrP 1146632..1148446 (-) 1815 WP_243602555.1 ABC transporter ATP-binding protein Regulator
  KIP81_RS05745 (KIP81_05745) rcrR 1148450..1148890 (-) 441 WP_243602556.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  KIP81_RS05750 (KIP81_05750) - 1149038..1149448 (-) 411 WP_243602557.1 peptide deformylase -
  KIP81_RS05755 (KIP81_05755) - 1149451..1149954 (-) 504 WP_243602558.1 GNAT family N-acetyltransferase -
  KIP81_RS05760 (KIP81_05760) gdhA 1150107..1151456 (-) 1350 WP_021142476.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 590 a.a.        Molecular weight: 65314.32 Da        Isoelectric Point: 4.9717

>NTDB_id=497415 KIP81_RS05735 WP_243602554.1 1144870..1146642(-) (rcrQ) [Streptococcus equinus strain SheepZ001]
MENKKKASFYSRMKPYIKGFQFPFILAVIGAIISATITVIGPDKLKEITNTIMDGLTPTKMGTIPGVDLDKVGEIAMTLA
ILYGVSAVVGYIQNFTVATIVQRFSQRLRAAIQVKINRVPLNYFDSHSQGDTLSRVTNDVDLLAQSLNQSLGTLVTSVVL
LFGSIFMMFHSNVSMALTAIGSVFIGFLLVIVIMGSSQPLFKRQQNNLAAVNGYVEEIYSGHNVVTSYNASEETSEAFKK
LNTNLYKSMWQSQFLSGIMMPLMIFIGNFGYVMVCVVGAVKVINGDITMGDVVAFMTYVRIFSQPLSQIAQAFTQMQSAT
AAMSRVFEFLEEEEMEDDSHKERQLTAVKGEVAFDNVFFGYSKDKTIIHDFSAVAKPGQKVAIVGPTGAGKTTIVNLLMK
FYEIDKGQISIDGIDTRNMSREEVHDQFSMVLQDTWLFEGTIKENLIYNQENITDEQVVAAAKAVGVHHFIMTLPDGYDT
YLDDSVTLSIGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIKNADLILVMKD
GNIIEQGNHDELMTEGGFYADLYNSQFEVA

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=497415 KIP81_RS05735 WP_243602554.1 1144870..1146642(-) (rcrQ) [Streptococcus equinus strain SheepZ001]
ATGGAAAATAAGAAAAAAGCATCTTTCTATAGCAGAATGAAGCCATATATCAAAGGTTTCCAATTTCCATTCATCCTTGC
GGTGATTGGAGCGATTATTTCTGCGACTATCACGGTTATTGGACCTGATAAATTAAAAGAGATTACAAATACGATTATGG
ACGGATTGACACCTACGAAAATGGGAACAATTCCAGGTGTTGATTTGGATAAAGTCGGAGAAATTGCAATGACACTTGCT
ATTTTGTATGGTGTCTCAGCTGTGGTTGGTTATATTCAAAACTTTACAGTTGCCACAATCGTCCAACGTTTTTCACAACG
ATTACGTGCAGCTATTCAAGTTAAAATTAACCGTGTTCCACTAAATTATTTTGATAGTCATTCACAAGGTGATACCCTTT
CTCGTGTGACAAACGATGTTGACTTACTTGCTCAATCACTTAACCAAAGTTTGGGAACATTAGTGACTTCTGTTGTGCTT
TTGTTTGGTTCAATTTTCATGATGTTCCATTCAAACGTCAGCATGGCTTTGACAGCTATCGGATCAGTTTTCATTGGTTT
CCTTTTGGTTATCGTCATTATGGGCTCATCACAACCATTGTTTAAACGCCAACAAAACAACTTGGCAGCAGTCAATGGTT
ATGTCGAAGAAATTTATTCTGGACACAATGTGGTAACAAGTTACAACGCGTCTGAAGAAACAAGTGAAGCCTTTAAGAAA
CTAAATACAAACCTTTATAAATCAATGTGGCAATCACAATTCTTGTCTGGTATTATGATGCCGCTGATGATTTTCATTGG
TAACTTTGGTTATGTTATGGTCTGTGTTGTTGGTGCCGTCAAAGTTATTAACGGTGATATTACAATGGGTGACGTGGTTG
CCTTTATGACTTACGTTCGTATCTTCTCACAACCATTGTCACAAATTGCGCAAGCCTTCACACAAATGCAATCAGCAACT
GCTGCAATGAGCCGTGTTTTTGAATTCCTTGAAGAAGAGGAAATGGAAGACGATTCTCACAAAGAACGTCAATTGACAGC
TGTTAAAGGTGAGGTTGCCTTTGATAATGTCTTCTTTGGTTATTCTAAAGATAAAACGATTATCCATGATTTCTCAGCTG
TTGCTAAACCAGGACAAAAAGTGGCTATCGTTGGACCAACAGGTGCTGGTAAAACAACCATTGTTAATTTGCTTATGAAA
TTCTATGAAATCGATAAAGGTCAAATCTCTATCGATGGTATCGATACTCGTAACATGTCACGAGAAGAAGTACACGACCA
ATTCTCAATGGTGCTTCAAGATACTTGGTTGTTTGAAGGTACAATCAAAGAAAACTTGATTTACAACCAAGAAAACATTA
CTGATGAACAAGTGGTTGCTGCAGCTAAGGCAGTCGGTGTTCACCACTTTATCATGACGCTTCCTGATGGATATGATACT
TATCTTGATGACTCAGTAACCCTTTCAATTGGTCAAAAACAACTTTTGACAATTGCGCGTGCGCTTTTGAAAGATGCTCC
GCTTCTTATCTTGGACGAAGCAACGTCATCAGTTGATACCCGTACTGAAGAATTGATTCAAAAAGCTATGGATAAATTGA
TGGAAGGTCGCACATCATTTGTAATTGCTCACCGTCTATCAACTATTAAAAACGCTGATCTTATCCTTGTTATGAAAGAT
GGTAACATCATCGAACAAGGAAATCATGATGAGTTGATGACAGAAGGTGGCTTCTATGCTGACCTTTACAACTCACAGTT
TGAAGTAGCATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(24-306)

ABC transporter (ABC_tran)

(370-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

72.973

100

0.732