Detailed information NTG0496690

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: INQ40_RS02805
• Genome accession: NZ_CP063772
• Coordinates: 619315..620772 (-)
• Length: 485 a.a.
• NCBI ID: WP_194341581.1
• Uniprot ID: -
• Organism: Lysobacter sp. H21R4
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 614315..625772

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
INQ40_RS02795 (INQ40_02795)	-	614718..617222 (+)	2505	WP_194341579.1	prolyl oligopeptidase family serine peptidase	-
INQ40_RS02800 (INQ40_02800)	-	617577..619178 (-)	1602	WP_194342383.1	SDR family oxidoreductase	-
INQ40_RS02805 (INQ40_02805)	pilR	619315..620772 (-)	1458	WP_194341581.1	sigma-54 dependent transcriptional regulator	Regulator
INQ40_RS02810 (INQ40_02810)	-	620794..622407 (-)	1614	WP_228482094.1	HAMP domain-containing sensor histidine kinase	-
INQ40_RS02815 (INQ40_02815)	sucC	622584..623747 (+)	1164	WP_194341585.1	ADP-forming succinate--CoA ligase subunit beta	-
INQ40_RS02820 (INQ40_02820)	sucD	623772..624647 (+)	876	WP_194341587.1	succinate--CoA ligase subunit alpha	-
INQ40_RS02825 (INQ40_02825)	-	625012..625710 (-)	699	WP_194341589.1	hypothetical protein	-

Sequence

Protein

• Length: 485 a.a.
• Molecular weight: 52590.19 Da
• Isoelectric Point: 6.1102

>NTDB_id=496690 INQ40_RS02805 WP_194341581.1 619315..620772(-) (pilR) [Lysobacter sp. H21R4]
MAETRSALIVDDERDIRELLVMTLGRMGLRCDTASSLGDARAHLARNRYDLCLTDMRLPDGSGIDLIAEISEQFPDTPVA
MITAFGNVDAAVEALKAGAFDFVAKPVELSVLRDLVRHALDLKEKPAVRANPENVATRLYGESPAMQQLRETITKVARSQ
APVYIAGESGVGKELVARTIHAEGSRGAGPFVPVNCGAIPNELMESEFFGHKKGSFTGAHADKPGLFHSADGGTLFLDEV
AELPLPMQVKLLRAIQEKSVKPVGANAEVMVDVRILSATHKDLAGMVADGRFRQDLYYRINVIELRVPPLRERLADLPGL
CAKIVQRLAADLGREPPALSAEAMDALGRYSFPGNVRELENILERAMAMADGDQLEVHDLHLPQTVTAHAPAHQAPREPG
VAPLQPLARGEQTPQAAAAAAGIDPRTIDPRDTATSALPSYIEEIERAAIQHALQENRYNKTRTAASLGITFRALRYKLK
KLGID

Nucleotide

• Length: 1458 bp

>NTDB_id=496690 INQ40_RS02805 WP_194341581.1 619315..620772(-) (pilR) [Lysobacter sp. H21R4]
ATGGCTGAGACACGCAGCGCTTTGATAGTCGATGACGAGCGCGATATCCGCGAGTTGCTGGTAATGACCCTGGGCCGCAT
GGGACTGCGCTGCGATACCGCATCCAGCCTGGGCGATGCCCGCGCGCACCTGGCCCGCAACCGCTACGACCTGTGCCTGA
CCGACATGCGCCTGCCCGACGGCTCCGGCATTGACCTGATCGCGGAAATTTCCGAGCAGTTCCCCGACACGCCGGTCGCG
ATGATCACCGCCTTTGGCAATGTGGACGCCGCGGTGGAGGCGCTCAAGGCGGGCGCGTTCGATTTCGTCGCCAAGCCGGT
CGAACTGTCGGTGTTGCGCGACCTGGTCCGCCATGCGCTGGACCTCAAGGAGAAGCCGGCGGTACGGGCCAACCCGGAAA
ACGTGGCCACCCGCCTGTATGGCGAATCGCCCGCAATGCAGCAATTGCGCGAGACCATCACCAAGGTCGCGCGCAGCCAG
GCGCCGGTGTACATCGCCGGCGAGTCGGGTGTCGGCAAGGAGCTGGTCGCCCGCACCATCCACGCTGAAGGCAGCCGCGG
CGCGGGCCCGTTCGTGCCGGTCAACTGCGGCGCGATCCCCAACGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAGG
GCAGCTTCACCGGCGCCCATGCCGACAAGCCCGGCCTGTTCCACAGCGCCGACGGCGGCACCCTGTTCCTGGACGAAGTC
GCCGAACTGCCGCTGCCGATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAATCGGTGAAACCGGTGGGAGCCAACGC
CGAGGTGATGGTGGATGTACGCATCCTCTCGGCCACGCACAAGGATCTGGCCGGCATGGTCGCCGATGGGCGCTTCCGCC
AGGACCTCTACTACCGCATCAATGTGATCGAGCTGCGCGTGCCGCCGCTGCGCGAGCGCCTGGCCGACCTGCCGGGCCTG
TGCGCGAAGATCGTCCAGCGCCTGGCTGCCGACCTGGGCCGCGAGCCGCCGGCGCTTTCGGCCGAGGCGATGGACGCACT
GGGCCGGTACAGCTTCCCGGGCAATGTGCGCGAGCTGGAGAACATCCTGGAACGCGCGATGGCGATGGCCGACGGGGATC
AGCTCGAAGTGCATGACCTACACCTGCCGCAGACGGTCACCGCACACGCCCCGGCGCATCAGGCGCCACGCGAACCCGGC
GTTGCGCCGTTGCAGCCGCTGGCGCGCGGCGAGCAGACGCCGCAGGCCGCGGCGGCGGCGGCGGGCATCGACCCGCGCAC
CATCGACCCGCGGGACACCGCGACCAGCGCGTTGCCCTCCTACATCGAGGAAATCGAACGCGCCGCCATCCAGCACGCCC
TGCAGGAAAACCGCTACAACAAGACCCGCACCGCCGCGTCGCTGGGCATCACCTTCCGCGCCTTGCGCTACAAGTTGAAG
AAGCTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-116)

• Bacterial regulatory protein, Fis family (HTH_8) (442-482)

• Sigma-54 interaction domain (Sigma54_activat) (140-305)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	58.42	99.175	0.579
pilR	Acinetobacter baumannii strain A118	46.516	100	0.468